Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 22 134 NP_001263689 22 134 NP_001119584 22 134 NP_001119586 22 134 NP_001263625 22 134 NP_001119590 22 134 NP_001263690 22 134 NP_001119585 22 134 NP_001263624 22 134 NP_001119588 22 134 NP_001119587 22 134 NP_001119589 22 134 NP_001263627 22 134 NP_001263628 22 134 NP_001263626 22 134 NP_000490 19 869 XP_005254242 19 869 NP_000752 18 1935 NP_000123 16 5631 NP_001091884 16 5631 NP_000566 16 5631 NP_919431 16 5631 NP_940886 16 5631 NP_038475 16 5631 NP_008970 16 5631 NP_057474 16 5631 NP_005850 16 5631 NP_689615 16 5631 XP_005276583 16 5631 XP_005259943 16 5631 XP_005259941 16 5631 XP_005255809 16 5631 XP_006720074 16 5631 XP_005267344 16 5631 XP_005265137 16 5631 XP_006713177 16 5631 XP_005265136 16 5631 XP_005275820 16 5631 NP_055748 16 7355 NP_001070676 16 7355 NP_001070675 16 7355 NP_001070674 16 7355 NP_057295 16 7355 NP_001177978 16 7355 XP_006714210 16 7355 XP_006714209 16 7355 XP_005262911 16 7355 XP_005262909 16 7355 XP_005262908 16 7355 XP_005262907 16 7355 XP_006714208 16 7355 XP_005262906 16 7355 XP_006714207 16 7355 XP_006714206 16 7355 XP_006714205 16 7355 XP_006714204 16 7355 XP_005262904 16 7355 NP_006062 16 7355 NP_976054 15 9605 NP_001207413 15 9605 NP_065186 15 9605 NP_060024 15 9605 NP_061923 15 9605 NP_001269444 15 9605 NP_001269447 15 9605 NP_003399 15 9605 XP_006720206 15 9605 XP_005250316 15 9605 XP_005263134 15 9605 XP_006714303 15 9605 XP_005263133 15 9605 XP_005263132 15 9605 XP_005263131 15 9605 XP_005263130 15 9605 XP_005248177 15 9605 XP_005248176 15 9605 XP_005248175 15 9605 XP_005247602 15 9605 NP_036304 15 9605 NP_001156971 15 9605 NP_071414 15 9605 NP_277041 15 9605>NP_000537 Length = 393 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 211 TFRHSVVVP 219>NP_001263689 Length = 354 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 172 TFRHSVVVP 180>NP_001119584 Length = 393 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 211 TFRHSVVVP 219>NP_001119586 Length = 341 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 211 TFRHSVVVP 219>NP_001263625 Length = 302 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 172 TFRHSVVVP 180>NP_001119590 Length = 354 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 172 TFRHSVVVP 180>NP_001263690 Length = 354 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 172 TFRHSVVVP 180>NP_001119585 Length = 346 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 211 TFRHSVVVP 219>NP_001263624 Length = 307 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 172 TFRHSVVVP 180>NP_001119588 Length = 209 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 79 TFRHSVVVP 87>NP_001119587 Length = 261 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 79 TFRHSVVVP 87>NP_001119589 Length = 214 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 79 TFRHSVVVP 87>NP_001263627 Length = 182 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 52 TFRHSVVVP 60>NP_001263628 Length = 187 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 52 TFRHSVVVP 60>NP_001263626 Length = 234 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TFRHSMVVP 9 TFRHS+VVP Sbjct: 52 TFRHSVVVP 60>NP_000490 Length = 512 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 TFRHS VP Sbjct: 375 TFRHSSFVP 383>XP_005254242 Length = 512 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 TFRHS VP Sbjct: 375 TFRHSSFVP 383>NP_000752 Length = 516 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 TFRHS +P Sbjct: 375 TFRHSSFLP 383>NP_000123 Length = 2351 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFRHSMV 7 TF+H MV Sbjct: 676 TFKHKMV 682>NP_001091884 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 TF H++++P Sbjct: 385 TFPHAVLIP 393>NP_000566 Length = 271 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TFRHSMVV 8 TF+ SMVV Sbjct: 66 TFKESMVV 73>NP_919431 Length = 1717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TFRHSMVVP 9 TF H VVP Sbjct: 1345 TFLHPSVVP 1353>NP_940886 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 TF H++++P Sbjct: 385 TFPHAVLIP 393>NP_038475 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TFRHSMVVP 9 TF H V+P Sbjct: 468 TFSHRSVIP 476>NP_008970 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RHS V+P Sbjct: 436 RHSAVIP 442>NP_057474 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRHSMVV 8 FRH++VV Sbjct: 304 FRHALVV 310>NP_005850 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T+R+S+ VP Sbjct: 252 TYRNSITVP 260>NP_689615 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 T +HS+ VP Sbjct: 52 TLQHSVAVP 60>XP_005276583 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHSMVVP 9 RHS+++P Sbjct: 23 RHSLLIP 29>XP_005259943 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TFRHSMVVP 9 TF H V+P Sbjct: 196 TFSHRSVIP 204>XP_005259941 Length = 892 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TFRHSMVVP 9 TF H V+P Sbjct: 537 TFSHRSVIP 545>XP_005255809 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHSMVVP 9 RHS+++P Sbjct: 23 RHSLLIP 29>XP_006720074 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RHS V+P Sbjct: 313 RHSAVIP 319>XP_005267344 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RHS V+P Sbjct: 436 RHSAVIP 442>XP_005265137 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 TF H++++P Sbjct: 350 TFPHAVLIP 358>XP_006713177 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 TF H++++P Sbjct: 377 TFPHAVLIP 385>XP_005265136 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 TF H++++P Sbjct: 377 TFPHAVLIP 385>XP_005275820 Length = 120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHSMVVP 9 RHS+++P Sbjct: 23 RHSLLIP 29>NP_055748 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>NP_001070676 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>NP_001070675 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>NP_001070674 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>NP_057295 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>NP_001177978 Length = 1200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 369 TAQHSIVLP 377>XP_006714210 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_006714209 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_005262911 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_005262909 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_005262908 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_005262907 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_006714208 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_005262906 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_006714207 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_006714206 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_006714205 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_006714204 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>XP_005262904 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRHSMVVP 9 T +HS+V+P Sbjct: 374 TAQHSIVLP 382>NP_006062 Length = 2253 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FRHSMVV 8 FRHS ++ Sbjct: 551 FRHSFII 557>NP_976054 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 TF+ MV+P Sbjct: 926 TFQDEMVLP 934>NP_001207413 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 TF+ MV+P Sbjct: 926 TFQDEMVLP 934>NP_065186 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RH +VVP Sbjct: 49 RHRIVVP 55>NP_060024 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HSMVVP 9 HS++VP Sbjct: 1753 HSLIVP 1758>NP_061923 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 515 SYKHDRVVP 523>NP_001269444 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TFRHS 5 TFRHS Sbjct: 400 TFRHS 404>NP_001269447 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TFRHS 5 TFRHS Sbjct: 386 TFRHS 390>NP_003399 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TFRHS 5 TFRHS Sbjct: 385 TFRHS 389>XP_006720206 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 TF+ MV+P Sbjct: 926 TFQDEMVLP 934>XP_005250316 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TFRHSM 6 TF HSM Sbjct: 277 TFHHSM 282>XP_005263134 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 515 SYKHDRVVP 523>XP_006714303 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 399 SYKHDRVVP 407>XP_005263133 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 464 SYKHDRVVP 472>XP_005263132 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 465 SYKHDRVVP 473>XP_005263131 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 515 SYKHDRVVP 523>XP_005263130 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 +++H VVP Sbjct: 515 SYKHDRVVP 523>XP_005248177 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RH +VVP Sbjct: 49 RHRIVVP 55>XP_005248176 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RH +VVP Sbjct: 49 RHRIVVP 55>XP_005248175 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHSMVVP 9 RH +VVP Sbjct: 49 RHRIVVP 55>XP_005247602 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HSMVVP 9 HS++VP Sbjct: 1617 HSLIVP 1622>NP_036304 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TFRHSM 6 TF HSM Sbjct: 277 TFHHSM 282>NP_001156971 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TFRHSM 6 TF HSM Sbjct: 227 TFHHSM 232>NP_071414 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHSMVVP 9 + +HS VVP Sbjct: 822 SIQHSSVVP 830>NP_277041 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TFRHSM 6 TF HSM Sbjct: 239 TFHHSM 244Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.136 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 568,644 Number of extensions: 941 Number of successful extensions: 82 Number of sequences better than 10000.0: 82 Number of HSP's gapped: 82 Number of HSP's successfully gapped: 82 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |