Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 19 869 NP_060785 19 869 NP_361014 19 869 NP_037522 17 2528 NP_001129292 17 2528 XP_006717096 17 2528 XP_005251926 17 2528 NP_065712 17 4312 NP_001035026 16 5631 NP_067017 16 5631 NP_036273 16 5631 NP_001120795 16 5631 NP_872346 16 5631 XP_006724804 16 5631 XP_006724803 16 5631 XP_005262451 16 5631 XP_005266397 16 5631 XP_006716001 16 5631 XP_006711500 16 5631 NP_000836 16 5631 NP_056383 16 5631 NP_061183 16 7355 NP_659418 16 7355 NP_005285 16 7355 NP_005551 16 7355 XP_006723861 16 7355 XP_006723860 16 7355 XP_006723859 16 7355 XP_005252872 16 7355 XP_005252871 16 7355 XP_006718231 16 7355 XP_005252869 16 7355 XP_005252868 16 7355 XP_006718230 16 7355 XP_005251990 16 7355 NP_004854 15 9605 NP_006080 15 9605 NP_078997 15 9605 NP_757385 15 9605 NP_115807 15 9605 XP_006724521 15 9605 XP_006724520 15 9605 XP_006718776 15 9605 XP_006718775 15 9605 NP_060797 15 9605>NP_001013433 Length = 589 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFGYLRAAN 9 TFG LRAAN Sbjct: 90 TFGDLRAAN 98>NP_060785 Length = 627 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFGYLRAAN 9 TFG LRAAN Sbjct: 128 TFGDLRAAN 136>NP_361014 Length = 707 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFGYLRAAN 9 TFG LRAAN Sbjct: 208 TFGDLRAAN 216>NP_037522 Length = 1383 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TFGYLRAAN 9 TFGYL+ N Sbjct: 1084 TFGYLQRQN 1092>NP_001129292 Length = 1320 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TFGYLRAAN 9 TFGYL+ N Sbjct: 1021 TFGYLQRQN 1029>XP_006717096 Length = 1217 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TFGYLRAAN 9 TFGYL+ N Sbjct: 1084 TFGYLQRQN 1092>XP_005251926 Length = 1383 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TFGYLRAAN 9 TFGYL+ N Sbjct: 1084 TFGYLQRQN 1092>NP_065712 Length = 198 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGYLRAAN 9 FGYLR N Sbjct: 46 FGYLRNKN 53>NP_001035026 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 352 FGYLKAS 358>NP_067017 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TFGYLRA 7 TFG++RA Sbjct: 71 TFGWIRA 77>NP_036273 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 365 FGYLKAS 371>NP_001120795 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GYLRAAN 9 GY+RA N Sbjct: 444 GYIRAVN 450>NP_872346 Length = 861 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 369 FGYLKAS 375>XP_006724804 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 369 FGYLKAS 375>XP_006724803 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 369 FGYLKAS 375>XP_005262451 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 369 FGYLKAS 375>XP_005266397 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FGYL+A+ Sbjct: 187 FGYLKAS 193>XP_006716001 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GYLRAAN 9 GY+RA N Sbjct: 444 GYIRAVN 450>XP_006711500 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TFGYLRA 7 T+G+LRA Sbjct: 20 TYGFLRA 26>NP_000836 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GYLRAAN 9 GY+RA N Sbjct: 444 GYIRAVN 450>NP_056383 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GYLRAA 8 GYLRAA Sbjct: 240 GYLRAA 245>NP_061183 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFGYLRA 7 T+GY RA Sbjct: 71 TYGYARA 77>NP_659418 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 151 FGFLRAS 157>NP_005285 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FGYLRAAN 9 FGYL N Sbjct: 19 FGYLETVN 26>NP_005551 Length = 3695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TFGYLR 6 +FGYLR Sbjct: 1385 SFGYLR 1390>XP_006723861 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TFGYLR 6 +FGYLR Sbjct: 1385 SFGYLR 1390>XP_006723860 Length = 2586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TFGYLR 6 +FGYLR Sbjct: 1385 SFGYLR 1390>XP_006723859 Length = 3700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TFGYLR 6 +FGYLR Sbjct: 1385 SFGYLR 1390>XP_005252872 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 115 FGFLRAS 121>XP_005252871 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 151 FGFLRAS 157>XP_006718231 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 151 FGFLRAS 157>XP_005252869 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 151 FGFLRAS 157>XP_005252868 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 151 FGFLRAS 157>XP_006718230 Length = 202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGYLRAA 8 FG+LRA+ Sbjct: 187 FGFLRAS 193>XP_005251990 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FGYLRAAN 9 FGYL N Sbjct: 19 FGYLETVN 26>NP_004854 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FGYLR 6 FGYLR Sbjct: 84 FGYLR 88>NP_006080 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FGYLRAAN 9 FGYL+ N Sbjct: 410 FGYLKPDN 417>NP_078997 Length = 3616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TFGYLRA 7 +FGY+R+ Sbjct: 286 SFGYIRS 292>NP_757385 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGYLRAA 8 FG LRAA Sbjct: 66 FGQLRAA 72>NP_115807 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGYLRAA 8 FG LRAA Sbjct: 66 FGQLRAA 72>XP_006724521 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FGYLRAAN 9 FGYL+ N Sbjct: 410 FGYLKPDN 417>XP_006724520 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FGYLRAAN 9 FGYL+ N Sbjct: 410 FGYLKPDN 417>XP_006718776 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGYLRAA 8 FG LRAA Sbjct: 66 FGQLRAA 72>XP_006718775 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGYLRAA 8 FG LRAA Sbjct: 66 FGQLRAA 72>NP_060797 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FGYLR 6 FGYLR Sbjct: 76 FGYLR 80Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.139 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 481,044 Number of extensions: 548 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |