Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1135 XP_006718908 18 1135 XP_005271621 18 1135 XP_006718907 18 1135 XP_006718906 18 1135 XP_005271619 18 1135 XP_005271618 18 1135 NP_001139281 16 5631 NP_001070654 16 5631 NP_079005 16 5631 NP_065845 16 5631 NP_003153 16 5631 XP_006723449 16 5631 XP_006719967 16 5631 XP_005252905 16 5631 XP_005264576 16 5631 XP_006710845 16 5631 XP_006710029 16 5631 NP_001108603 16 7355 NP_000056 16 7355 NP_115665 16 7355 NP_001029025 16 7355 NP_000958 16 7355 XP_006714864 16 7355 XP_006714560 16 7355 XP_005248414 16 7355 XP_005248413 16 7355 XP_006714559 16 7355 NP_001277738 15 9605 NP_387512 15 9605 NP_001269492 15 9605 NP_000787 15 9605 NP_037370 15 9605 NP_997004 15 9605 NP_001276075 15 9605 NP_001035812 15 9605 NP_113612 15 9605 NP_001276074 15 9605 NP_001240628 15 9605 NP_001276076 15 9605 NP_001240630 15 9605 NP_001006600 15 9605 NP_061165 15 9605 NP_001240627 15 9605 NP_001240626 15 9605 XP_006714723 15 9605 XP_005248613 15 9605 XP_005248612 15 9605 XP_005248611 15 9605 XP_006713585 15 9605>NP_000042 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 2743 TETRKRKLT 2751>XP_006718908 Length = 1708 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 1395 TETRKRKLT 1403>XP_005271621 Length = 2708 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 2395 TETRKRKLT 2403>XP_006718907 Length = 3050 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 2737 TETRKRKLT 2745>XP_006718906 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 2743 TETRKRKLT 2751>XP_005271619 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 2743 TETRKRKLT 2751>XP_005271618 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TETRKR LT Sbjct: 2743 TETRKRKLT 2751>NP_001139281 Length = 2036 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ETR+RIL+ Sbjct: 1891 ETRERILS 1898>NP_001070654 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ETR+RIL+ Sbjct: 1858 ETRERILS 1865>NP_079005 Length = 1995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ETR+RIL+ Sbjct: 1850 ETRERILS 1857>NP_065845 Length = 1537 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ET++R+LT Sbjct: 416 ETKQRVLT 423>NP_003153 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ET++RILT Sbjct: 645 ETQQRILT 652>XP_006723449 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ETR+RIL+ Sbjct: 1858 ETRERILS 1865>XP_006719967 Length = 144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TET +RIL+ Sbjct: 62 TETMRRILS 70>XP_005252905 Length = 1854 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TETRKR 6 TETRKR Sbjct: 1288 TETRKR 1293>XP_005264576 Length = 743 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ET++RILT Sbjct: 608 ETQQRILT 615>XP_006710845 Length = 1492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETRKRILT 9 ET++R+LT Sbjct: 454 ETKQRVLT 461>XP_006710029 Length = 144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 TET +RIL+ Sbjct: 62 TETMRRILS 70>NP_001108603 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETRKRIL 8 ET+KR+L Sbjct: 403 ETKKRVL 409>NP_000056 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETRKRIL 8 ET+KR+L Sbjct: 403 ETKKRVL 409>NP_115665 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 T+ R+R+LT Sbjct: 378 TQERERVLT 386>NP_001029025 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRKRILT 9 T+KR+LT Sbjct: 291 TKKRVLT 297>NP_000958 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRKRILT 9 T+KR+LT Sbjct: 340 TKKRVLT 346>XP_006714864 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 T+ R+R+LT Sbjct: 378 TQERERVLT 386>XP_006714560 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETRKRIL 8 ET+KR+L Sbjct: 264 ETKKRVL 270>XP_005248414 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETRKRIL 8 ET+KR+L Sbjct: 412 ETKKRVL 418>XP_005248413 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETRKRIL 8 ET+KR+L Sbjct: 403 ETKKRVL 409>XP_006714559 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETRKRIL 8 ET+KR+L Sbjct: 412 ETKKRVL 418>NP_001277738 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKRILT 9 RKRILT Sbjct: 220 RKRILT 225>NP_387512 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKRILT 9 RKRILT Sbjct: 220 RKRILT 225>NP_001269492 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKRILT 9 RKRILT Sbjct: 220 RKRILT 225>NP_000787 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKRILT 9 RKRILT Sbjct: 220 RKRILT 225>NP_037370 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TETRKRILT 9 TET K+I T Sbjct: 69 TETAKKIST 77>NP_997004 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ETRKRILT 9 ETR+ +LT Sbjct: 80 ETRRTVLT 87>NP_001276075 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ETRKRILT 9 ETR+ +LT Sbjct: 80 ETRRTVLT 87>NP_001035812 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ETRKRILT 9 ETR+ +LT Sbjct: 80 ETRRTVLT 87>NP_113612 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ETRKRILT 9 ETR+ +LT Sbjct: 80 ETRRTVLT 87>NP_001276074 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ETRKRILT 9 ETR+ +LT Sbjct: 80 ETRRTVLT 87>NP_001240628 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>NP_001276076 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ETRKRILT 9 ETR+ +LT Sbjct: 80 ETRRTVLT 87>NP_001240630 Length = 1367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>NP_001006600 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>NP_061165 Length = 1371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>NP_001240627 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>NP_001240626 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>XP_006714723 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>XP_005248613 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>XP_005248612 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>XP_005248611 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TETRKRILT 9 +ET+K +LT Sbjct: 415 SETQKMVLT 423>XP_006713585 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKRILT 9 RKRILT Sbjct: 220 RKRILT 225Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.127 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,895 Number of extensions: 716 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |