Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 509 NP_001784 18 1935 NP_001004434 17 3301 NP_115902 17 3301 NP_057306 17 4312 NP_004389 17 4312 XP_006714933 17 4312 NP_006074 17 4312 NP_008988 16 5631 NP_001005413 16 5631 NP_127490 16 5631 XP_005269520 16 5631 NP_004130 16 7355 NP_001129502 16 7355 NP_001092285 16 7355 NP_001248773 16 7355 NP_055611 16 7355 NP_008860 16 7355 NP_001716 16 7355 XP_006725560 16 7355 XP_005260579 16 7355 XP_005269304 16 7355 XP_006719779 16 7355 XP_005269303 16 7355 XP_006719778 16 7355 XP_005269302 16 7355 XP_005269301 16 7355 XP_005269300 16 7355 XP_006715231 16 7355 NP_001759 15 9605 NP_001139345 15 9605 NP_055415 15 9605 NP_055951 15 9605 NP_003728 15 9605 NP_006786 15 9605 NP_001248342 15 9605 NP_006391 15 9605 NP_001248341 15 9605 NP_001269373 15 9605 NP_000420 15 9605 NP_065961 15 9605 NP_001158137 15 9605 NP_001269374 15 9605 XP_006718487 15 9605 XP_005253264 15 9605 XP_005269899 15 9605 XP_006716135 15 9605 XP_006716134 15 9605 XP_005265032 15 9605 XP_005265031 15 9605 XP_005265030 15 9605>NP_004351 Length = 882 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAKGLDFAA 9 TAKGLDF A Sbjct: 438 TAKGLDFEA 446>NP_001784 Length = 829 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TAKGLDFAA 9 T KGLDF A Sbjct: 392 TRKGLDFEA 400>NP_001004434 Length = 372 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAKGLDFAA 9 T KG+DF A Sbjct: 281 TPKGVDFTA 289>NP_115902 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAKGLDFAA 9 T KG+DF A Sbjct: 232 TPKGVDFTA 240>NP_057306 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 +KGLDF A Sbjct: 493 SKGLDFPA 500>NP_004389 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 A+GLDF A Sbjct: 376 ARGLDFPA 383>XP_006714933 Length = 496 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 +KGLDF A Sbjct: 367 SKGLDFPA 374>NP_006074 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KGLDFA Sbjct: 164 KGLDFA 169>NP_008988 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAKGLD 6 TAKGLD Sbjct: 72 TAKGLD 77>NP_001005413 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAKGLD 6 TAKGLD Sbjct: 72 TAKGLD 77>NP_127490 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAKGLD 6 TAKGLD Sbjct: 72 TAKGLD 77>XP_005269520 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAKGLD 6 TAKGLD Sbjct: 72 TAKGLD 77>NP_004130 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAKGLDFAA 9 T KGL +AA Sbjct: 35 TDKGLQYAA 43>NP_001129502 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>NP_001092285 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>NP_001248773 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 54 AKGIDF 59>NP_055611 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 54 AKGIDF 59>NP_008860 Length = 1246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KG+DFA Sbjct: 192 KGMDFA 197>NP_001716 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KGLDFAA 9 KGLD+A+ Sbjct: 43 KGLDYAS 49>XP_006725560 Length = 1031 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KG+DFA Sbjct: 192 KGMDFA 197>XP_005260579 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KGLDFAA 9 KGLD+A+ Sbjct: 43 KGLDYAS 49>XP_005269304 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 54 AKGIDF 59>XP_006719779 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>XP_005269303 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>XP_006719778 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>XP_005269302 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>XP_005269301 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>XP_005269300 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGLDF 7 AKG+DF Sbjct: 192 AKGIDF 197>XP_006715231 Length = 1031 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KG+DFA Sbjct: 192 KGMDFA 197>NP_001759 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 +GLDFA Sbjct: 175 RGLDFA 180>NP_001139345 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 +GLDFA Sbjct: 175 RGLDFA 180>NP_055415 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 ++G DFAA Sbjct: 166 SRGYDFAA 173>NP_055951 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAKGLDF 7 T +GLDF Sbjct: 2349 TQRGLDF 2355>NP_003728 Length = 3298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TAKGLDF 7 +A+GLDF Sbjct: 2128 SAEGLDF 2134>NP_006786 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 ++G DFAA Sbjct: 166 SRGYDFAA 173>NP_001248342 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KGLDF+ Sbjct: 65 KGLDFS 70>NP_006391 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KGLDF+ Sbjct: 70 KGLDFS 75>NP_001248341 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGLDFA 8 KGLDF+ Sbjct: 67 KGLDFS 72>NP_001269373 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 ++G DFAA Sbjct: 166 SRGYDFAA 173>NP_000420 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAKGLDF 7 +AKG DF Sbjct: 95 SAKGFDF 101>NP_065961 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TAKGLDFA 8 + KG DFA Sbjct: 1349 SVKGFDFA 1356>NP_001158137 Length = 1950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TAKGLDFA 8 + KG DFA Sbjct: 1349 SVKGFDFA 1356>NP_001269374 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 ++G DFAA Sbjct: 180 SRGYDFAA 187>XP_006718487 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKGLDFAA 9 ++G DFAA Sbjct: 166 SRGYDFAA 173>XP_005253264 Length = 3443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TAKGLDF 7 +A+GLDF Sbjct: 2273 SAEGLDF 2279>XP_005269899 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAKGLDF 7 +AKG DF Sbjct: 95 SAKGFDF 101>XP_006716135 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TAKGLDFA 8 + KG DFA Sbjct: 133 SVKGFDFA 140>XP_006716134 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TAKGLDFA 8 + KG DFA Sbjct: 1246 SVKGFDFA 1253>XP_005265032 Length = 2545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAKGLDF 7 T +GLDF Sbjct: 2299 TQRGLDF 2305>XP_005265031 Length = 2569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAKGLDF 7 T +GLDF Sbjct: 2349 TQRGLDF 2355>XP_005265030 Length = 2595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAKGLDF 7 T +GLDF Sbjct: 2349 TQRGLDF 2355Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,314 Number of extensions: 642 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |