Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006071 15 9605 NP_004450 15 9605 NP_872579 15 9605 XP_005257219 15 9605 XP_005257218 15 9605 XP_005257217 15 9605 XP_005257216 15 9605 XP_005257215 15 9605 XP_005257214 15 9605 XP_005257213 15 9605 XP_005257212 15 9605 XP_006721834 15 9605 XP_005257211 15 9605 XP_005257210 15 9605 XP_005257209 15 9605 XP_005257208 15 9605 XP_006721833 15 9605 XP_005257207 15 9605 XP_006715902 15 9605 XP_006715901 15 9605 XP_005250168 15 9605 XP_005250167 15 9605 NP_829884 15 9605 NP_829883 15 9605>NP_006071 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TAITTMEL 8 TAI+ MEL Sbjct: 487 TAISAMEL 494>NP_004450 Length = 2903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>NP_872579 Length = 2920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1814 TEITTTEII 1822>XP_005257219 Length = 2038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257218 Length = 2957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257217 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257216 Length = 3015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257215 Length = 3032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1814 TEITTTEII 1822>XP_005257214 Length = 3094 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1876 TEITTTEII 1884>XP_005257213 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1877 TEITTTEII 1885>XP_005257212 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1877 TEITTTEII 1885>XP_006721834 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257211 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257210 Length = 3104 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257209 Length = 3148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257208 Length = 3157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1939 TEITTTEII 1947>XP_006721833 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_005257207 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAITTMELI 9 T ITT E+I Sbjct: 1940 TEITTTEII 1948>XP_006715902 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TAITTMEL 8 TAI+ MEL Sbjct: 487 TAISAMEL 494>XP_006715901 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TAITTMEL 8 TAI+ MEL Sbjct: 487 TAISAMEL 494>XP_005250168 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TAITTMEL 8 TAI+ MEL Sbjct: 487 TAISAMEL 494>XP_005250167 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TAITTMEL 8 TAI+ MEL Sbjct: 487 TAISAMEL 494>NP_829884 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TAITTME 7 TA+TT+E Sbjct: 613 TALTTLE 619>NP_829883 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TAITTME 7 TA+TT+E Sbjct: 585 TALTTLE 591Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.127 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 328,295 Number of extensions: 332 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |