Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 299 NP_001185763 20 299 NP_055459 20 299 XP_006726410 20 299 XP_006711719 20 299 XP_006711718 20 299 XP_006711717 20 299 XP_006711716 20 299 XP_006711715 20 299 XP_006711714 20 299 XP_006711713 20 299 XP_006711712 20 299 XP_006711711 20 299 XP_006711710 20 299 XP_006711709 20 299 XP_005277503 20 299 XP_005273038 20 299 XP_006711708 20 299 XP_005277500 20 299 XP_006711707 20 299 XP_005277499 20 299 XP_006711706 20 299 XP_006711705 20 299 XP_006711164 20 299 XP_006710140 20 299 NP_612154 18 1935 NP_060876 18 1935 NP_004523 18 1935 NP_001265478 17 4312 NP_002601 17 4312 NP_570971 17 4312 NP_775179 17 4312 NP_001167532 17 4312 NP_963862 17 4312 NP_963863 17 4312 XP_005258568 17 4312 XP_006720476 17 4312 XP_006712658 17 4312 XP_006712657 17 4312 XP_006711741 17 4312 XP_006711740 17 4312 XP_005245713 17 4312 XP_005245712 17 4312 XP_005245710 17 4312 XP_005245711 17 4312 XP_006711739 17 4312 XP_005245709 17 4312 XP_006711738 17 4312 XP_006711737 17 4312 XP_005245706 17 4312 XP_005245705 17 4312 XP_005245704 17 4312 NP_789781 17 4312 NP_005425 16 5631 NP_005637 16 7355 NP_057349 16 7355 NP_008887 16 7355 XP_006711875 16 7355 XP_005273291 16 7355 NP_001103408 15 9605 NP_001154848 15 9605 NP_659466 15 9605 NP_821074 15 9605 XP_005260717 15 9605 NP_001004058 15 9605 NP_542789 15 9605>NP_001185761 Length = 2240 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1672 SYYLNSAQ 1679>NP_001185763 Length = 2362 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1778 SYYLNSAQ 1785>NP_055459 Length = 2346 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1778 SYYLNSAQ 1785>XP_006726410 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1519 SYYLNSAQ 1526>XP_006711719 Length = 2302 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1734 SYYLNSAQ 1741>XP_006711718 Length = 1436 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 785 SYYLNSAQ 792>XP_006711717 Length = 2385 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1734 SYYLNSAQ 1741>XP_006711716 Length = 2411 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1843 SYYLNSAQ 1850>XP_006711715 Length = 2428 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1777 SYYLNSAQ 1784>XP_006711714 Length = 2429 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1778 SYYLNSAQ 1785>XP_006711713 Length = 2432 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1781 SYYLNSAQ 1788>XP_006711712 Length = 2473 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_006711711 Length = 2482 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1831 SYYLNSAQ 1838>XP_006711710 Length = 2494 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1843 SYYLNSAQ 1850>XP_006711709 Length = 2495 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1844 SYYLNSAQ 1851>XP_005277503 Length = 2498 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_005273038 Length = 2509 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_006711708 Length = 2512 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_005277500 Length = 2525 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_006711707 Length = 2553 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_005277499 Length = 2561 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_006711706 Length = 2591 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1940 SYYLNSAQ 1947>XP_006711705 Length = 2592 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1941 SYYLNSAQ 1948>XP_006711164 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 1519 SYYLNSAQ 1526>XP_006710140 Length = 290 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SYYLNSAQ Sbjct: 31 SYYLNSAQ 38>NP_612154 Length = 1125 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SY+LNSA+ Sbjct: 1115 SYFLNSAE 1122>NP_060876 Length = 5412 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SY+LNSA+ Sbjct: 5402 SYFLNSAE 5409>NP_004523 Length = 1176 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYYLNSAQ 8 SY+LNSA+ Sbjct: 1166 SYFLNSAE 1173>NP_001265478 Length = 456 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YYLNSAQL 9 YY+NS +L Sbjct: 263 YYINSPEL 270>NP_002601 Length = 436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YYLNSAQL 9 YY+NS +L Sbjct: 243 YYINSPEL 250>NP_570971 Length = 926 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YYLNSAQ 8 YYL SAQ Sbjct: 656 YYLTSAQ 662>NP_775179 Length = 1137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 173 SYYRHAAQL 181>NP_001167532 Length = 1145 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 131 SYYRHAAQL 139>NP_963862 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 173 SYYRHAAQL 181>NP_963863 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 173 SYYRHAAQL 181>XP_005258568 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 +YYL+ AQL Sbjct: 833 AYYLSVAQL 841>XP_006720476 Length = 933 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YYLNSAQ 8 YYL SAQ Sbjct: 663 YYLTSAQ 669>XP_006712658 Length = 244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YYLNSAQL 9 YY+NS +L Sbjct: 51 YYINSPEL 58>XP_006712657 Length = 281 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YYLNSAQL 9 YY+NS +L Sbjct: 263 YYINSPEL 270>XP_006711741 Length = 1141 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 173 SYYRHAAQL 181>XP_006711740 Length = 1143 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 225 SYYRHAAQL 233>XP_005245713 Length = 1169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 155 SYYRHAAQL 163>XP_005245712 Length = 1169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 155 SYYRHAAQL 163>XP_005245710 Length = 1169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 155 SYYRHAAQL 163>XP_005245711 Length = 1169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 155 SYYRHAAQL 163>XP_006711739 Length = 1170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 202 SYYRHAAQL 210>XP_005245709 Length = 1187 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 173 SYYRHAAQL 181>XP_006711738 Length = 1189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 225 SYYRHAAQL 233>XP_006711737 Length = 1193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 225 SYYRHAAQL 233>XP_005245706 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 202 SYYRHAAQL 210>XP_005245705 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 202 SYYRHAAQL 210>XP_005245704 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 SYY ++AQL Sbjct: 225 SYYRHAAQL 233>NP_789781 Length = 1048 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 +YYL+ AQL Sbjct: 833 AYYLSVAQL 841>NP_005425 Length = 153 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YYLNSA 7 YY+NSA Sbjct: 126 YYINSA 131>NP_005637 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YYLNSAQ 8 YY+NS Q Sbjct: 1159 YYVNSLQ 1165>NP_057349 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SYYLNSA 7 ++YLNSA Sbjct: 473 TFYLNSA 479>NP_008887 Length = 659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SYYLNSA 7 ++YLNSA Sbjct: 435 TFYLNSA 441>XP_006711875 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YYLNSAQ 8 YY+NS Q Sbjct: 703 YYVNSLQ 709>XP_005273291 Length = 1620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YYLNSAQ 8 YY+NS Q Sbjct: 1158 YYVNSLQ 1164>NP_001103408 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 ++YLNS+ L Sbjct: 262 TFYLNSSGL 270>NP_001154848 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 ++YLNS+ L Sbjct: 443 TFYLNSSGL 451>NP_659466 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYYLNSAQL 9 ++YLNS+ L Sbjct: 128 TFYLNSSGL 136>NP_821074 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YYLNS 6 YYLNS Sbjct: 14 YYLNS 18>XP_005260717 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YYLNS 6 YYLNS Sbjct: 798 YYLNS 802>NP_001004058 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SYYLNSAQL 9 SYY +AQL Sbjct: 93 SYYACAAQL 101>NP_542789 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YYLNS 6 YYLNS Sbjct: 773 YYLNS 777Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.122 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,123 Number of extensions: 314 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |