Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000224 20 299 NP_000360 20 299 XP_005268094 20 299 XP_005264366 20 299 XP_006712078 20 299 NP_852111 19 869 NP_000136 19 869 NP_078966 17 3301 NP_078858 16 5631 NP_001278232 16 5631 NP_001278214 16 5631 NP_001275918 16 5631 NP_001159451 16 5631 NP_057425 16 5631 NP_001718 16 5631 XP_005262522 16 5631 XP_005262521 16 5631 XP_006717953 16 5631 XP_006717952 16 5631 XP_006717951 16 5631 XP_006717950 16 5631 XP_006717949 16 5631 XP_006717948 16 5631 NP_061822 16 5631 NP_001001967 16 5631 NP_065866 16 7355 NP_116586 16 7355 NP_006197 16 7355 NP_071407 16 7355 NP_065831 16 7355 NP_005062 16 7355 XP_006722907 16 7355 XP_006722906 16 7355 XP_006722905 16 7355 XP_006718005 16 7355 XP_006718004 16 7355 XP_006718003 16 7355 XP_006714104 16 7355 XP_005265800 16 7355 XP_006714103 16 7355 XP_006714102 16 7355 XP_005275746 16 7355 XP_003403671 16 7355 XP_006710003 16 7355 NP_001005197 16 7355 NP_001005213 16 7355 NP_003688 16 7355 NP_001013376 16 7355 NP_001040 15 9605 NP_057613 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_004707 15 9605 NP_596870 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_060919 15 9605 NP_006086 15 9605 NP_001098999 15 9605 NP_001269458 15 9605 XP_006719897 15 9605 XP_006719896 15 9605 XP_006719895 15 9605 XP_005266476 15 9605 XP_006719002 15 9605 XP_006719001 15 9605 XP_006714052 15 9605 XP_005248100 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_004239 15 9605 NP_001004477 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000224 Length = 699 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SVYTLTV+T Sbjct: 453 SVYTLTVIT 461>NP_000360 Length = 764 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SVYTLTV+T Sbjct: 508 SVYTLTVIT 516>XP_005268094 Length = 764 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SVYTLTV+T Sbjct: 508 SVYTLTVIT 516>XP_005264366 Length = 380 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SVYTLTV+T Sbjct: 134 SVYTLTVIT 142>XP_006712078 Length = 389 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SVYTLTV+T Sbjct: 143 SVYTLTVIT 151>NP_852111 Length = 669 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVYTLT +T Sbjct: 430 SVYTLTAIT 438>NP_000136 Length = 695 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVYTLT +T Sbjct: 456 SVYTLTAIT 464>NP_078966 Length = 14507 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SVYTLTVVT 9 S YTLTV T Sbjct: 145 STYTLTVET 153>NP_078858 Length = 4981 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SVYTLTVV 8 S YTLTVV Sbjct: 2118 SNYTLTVV 2125>NP_001278232 Length = 4983 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SVYTLTVV 8 S YTLTVV Sbjct: 2118 SNYTLTVV 2125>NP_001278214 Length = 4982 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SVYTLTVV 8 S YTLTVV Sbjct: 2118 SNYTLTVV 2125>NP_001275918 Length = 2286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1853 AVYSLTIVS 1861>NP_001159451 Length = 1994 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1561 AVYSLTIVS 1569>NP_057425 Length = 2302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1869 AVYSLTIVS 1877>NP_001718 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SV+TLT+++ Sbjct: 134 SVFTLTILS 142>XP_005262522 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SV+TLT+++ Sbjct: 134 SVFTLTILS 142>XP_005262521 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 SV+TLT+++ Sbjct: 134 SVFTLTILS 142>XP_006717953 Length = 2008 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1575 AVYSLTIVS 1583>XP_006717952 Length = 2300 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1867 AVYSLTIVS 1875>XP_006717951 Length = 2315 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1882 AVYSLTIVS 1890>XP_006717950 Length = 2316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1883 AVYSLTIVS 1891>XP_006717949 Length = 2316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1883 AVYSLTIVS 1891>XP_006717948 Length = 2316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 +VY+LT+V+ Sbjct: 1883 AVYSLTIVS 1891>NP_061822 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVYTLTVVT 9 S++TLTV++ Sbjct: 137 SIFTLTVMS 145>NP_001001967 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 VYT+TVV Sbjct: 36 VYTVTVV 42>NP_065866 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 429 YTLTVV 434>NP_116586 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 429 YTLTVV 434>NP_006197 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VYTLTV 7 VYTLTV Sbjct: 272 VYTLTV 277>NP_071407 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1385 YTLTVV 1390>NP_065831 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VYTLTVVT 9 +YTLTV T Sbjct: 1331 LYTLTVST 1338>NP_005062 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006722907 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006722906 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006722905 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 +YTLTV+ Sbjct: 341 MYTLTVI 347>XP_006718005 Length = 3397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1428 YTLTVV 1433>XP_006718004 Length = 3399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1430 YTLTVV 1435>XP_006718003 Length = 3419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1450 YTLTVV 1455>XP_006714104 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VYTLTV 7 VYTLTV Sbjct: 297 VYTLTV 302>XP_005265800 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VYTLTV 7 VYTLTV Sbjct: 272 VYTLTV 277>XP_006714103 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VYTLTV 7 VYTLTV Sbjct: 294 VYTLTV 299>XP_006714102 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VYTLTV 7 VYTLTV Sbjct: 297 VYTLTV 302>XP_005275746 Length = 3352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1383 YTLTVV 1388>XP_003403671 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1385 YTLTVV 1390>XP_006710003 Length = 3374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLTVV Sbjct: 1405 YTLTVV 1410>NP_001005197 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 +YT+TVV Sbjct: 34 IYTVTVV 40>NP_001005213 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 VY+LTVV Sbjct: 33 VYSLTVV 39>NP_003688 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 +YTLTV+ Sbjct: 34 IYTLTVL 40>NP_001013376 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VYTLTVV 8 VY+LTVV Sbjct: 33 VYSLTVV 39>NP_001040 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 S+Y LTV++ Sbjct: 144 SIYCLTVLS 152>NP_057613 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT VVT Sbjct: 1004 VYTYVVVT 1011>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2395 SVYSVDVIT 2403>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2395 SVYSVDVIT 2403>NP_004707 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVYTLTV 7 S+YT+T+ Sbjct: 345 SIYTVTI 351>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2441 SVYSVDVIT 2449>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2441 SVYSVDVIT 2449>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2441 SVYSVDVIT 2449>NP_060919 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVYTLTVVT 9 S YT +V+T Sbjct: 588 STYTTSVIT 596>NP_006086 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT V+T Sbjct: 984 VYTFVVIT 991>NP_001098999 Length = 1149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT V+T Sbjct: 969 VYTFVVIT 976>NP_001269458 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVYTLTVVT 9 S YT +V+T Sbjct: 321 STYTTSVIT 329>XP_006719897 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT VVT Sbjct: 964 VYTYVVVT 971>XP_006719896 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT VVT Sbjct: 821 VYTYVVVT 828>XP_006719895 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT VVT Sbjct: 898 VYTYVVVT 905>XP_005266476 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT VVT Sbjct: 964 VYTYVVVT 971>XP_006719002 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVYTLTV 7 S+YT+T+ Sbjct: 345 SIYTVTI 351>XP_006719001 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVYTLTV 7 S+YT+T+ Sbjct: 345 SIYTVTI 351>XP_006714052 Length = 1000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT V+T Sbjct: 820 VYTFVVIT 827>XP_005248100 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VYTLTVVT 9 VYT V+T Sbjct: 984 VYTFVVIT 991>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2442 SVYSVDVIT 2450>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2442 SVYSVDVIT 2450>NP_004239 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVYTLTVV 8 SV+TLT + Sbjct: 148 SVFTLTTI 155>NP_001004477 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YTLTVV 8 YTLT+V Sbjct: 89 YTLTIV 94>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2441 SVYSVDVIT 2449>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVYTLTVVT 9 SVY++ V+T Sbjct: 2395 SVYSVDVIT 2403Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.124 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 364,308 Number of extensions: 593 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |