Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_001263627 18 1135 NP_001263628 18 1135 NP_001263626 18 1135 NP_009089 17 2528 NP_001007554 17 2528 NP_001229820 17 2528 NP_001123995 17 2528 NP_001229822 17 2528 NP_001229821 17 2528 NP_778253 17 3301 NP_001069 16 5631 NP_001186763 16 5631 NP_542413 16 5631 NP_001123996 16 5631 NP_859078 16 5631 NP_001007227 15 9605 NP_003554 15 9605 NP_001007230 15 9605 NP_001007228 15 9605 NP_001007231 15 9605 NP_001007229 15 9605 NP_001238774 15 9605 NP_001269404 15 9605 NP_004873 15 9605 NP_003908 15 9605 NP_003295 15 9605 XP_005257781 15 9605 XP_005257780 15 9605 XP_005268239 15 9605 XP_005268238 15 9605 XP_005268237 15 9605 XP_005268236 15 9605 XP_005268234 15 9605 XP_005268235 15 9605 XP_005268233 15 9605 XP_005268231 15 9605 XP_005268232 15 9605 XP_005268230 15 9605 XP_005268229 15 9605 XP_005268228 15 9605 XP_006720364 15 9605 XP_005268227 15 9605 XP_005268226 15 9605 XP_005268225 15 9605 XP_005268224 15 9605 XP_005268223 15 9605 XP_005247797 15 9605 NP_113603 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 261 SGNLLGRNS 269>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 222 SGNLLGRNS 230>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 261 SGNLLGRNS 269>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 261 SGNLLGRNS 269>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 222 SGNLLGRNS 230>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 222 SGNLLGRNS 230>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 222 SGNLLGRNS 230>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 261 SGNLLGRNS 269>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 222 SGNLLGRNS 230>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 129 SGNLLGRNS 137>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 129 SGNLLGRNS 137>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 129 SGNLLGRNS 137>NP_001263627 Length = 182 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 102 SGNLLGRNS 110>NP_001263628 Length = 187 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 102 SGNLLGRNS 110>NP_001263626 Length = 234 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 S NLLGRNS Sbjct: 102 SGNLLGRNS 110>NP_009089 Length = 767 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 V LLGRNS Sbjct: 476 VRLLGRNS 483>NP_001007554 Length = 798 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 V LLGRNS Sbjct: 507 VRLLGRNS 514>NP_001229820 Length = 844 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 V LLGRNS Sbjct: 553 VRLLGRNS 560>NP_001123995 Length = 813 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 V LLGRNS Sbjct: 522 VRLLGRNS 529>NP_001229822 Length = 767 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 V LLGRNS Sbjct: 476 VRLLGRNS 483>NP_001229821 Length = 798 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 V LLGRNS Sbjct: 507 VRLLGRNS 514>NP_778253 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVNLLGRNS 9 S+NL+GR++ Sbjct: 71 SINLMGRST 79>NP_001069 Length = 739 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VNLLGRN 8 VNL+G+N Sbjct: 294 VNLIGKN 300>NP_001186763 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VNLLGRN 8 VNL+G+N Sbjct: 232 VNLIGKN 238>NP_542413 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VNLLGRN 8 VNL+G+N Sbjct: 294 VNLIGKN 300>NP_001123996 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 SVNLLG+ Sbjct: 178 SVNLLGK 184>NP_859078 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VNLLGRNS 9 +NLLGR S Sbjct: 99 INLLGRPS 106>NP_001007227 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>NP_003554 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>NP_001007230 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>NP_001007228 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>NP_001007231 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>NP_001007229 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>NP_001238774 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VNLLGRNS 9 V++LGRN+ Sbjct: 80 VDVLGRNA 87>NP_001269404 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 238 AVNILGR 244>NP_004873 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NLLGRN 8 N+LGRN Sbjct: 184 NVLGRN 189>NP_003908 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 310 AVNILGR 316>NP_003295 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VNLLGRNS 9 V++LGRN+ Sbjct: 80 VDVLGRNA 87>XP_005257781 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>XP_005257780 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNLLGRNS 9 SVN+ G+N+ Sbjct: 167 SVNISGQNT 175>XP_005268239 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 100 AVNILGR 106>XP_005268238 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 401 AVNILGR 407>XP_005268237 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 165 AVNILGR 171>XP_005268236 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 181 AVNILGR 187>XP_005268234 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 181 AVNILGR 187>XP_005268235 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 181 AVNILGR 187>XP_005268233 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 401 AVNILGR 407>XP_005268231 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 238 AVNILGR 244>XP_005268232 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 238 AVNILGR 244>XP_005268230 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 310 AVNILGR 316>XP_005268229 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 310 AVNILGR 316>XP_005268228 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 344 AVNILGR 350>XP_006720364 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 367 AVNILGR 373>XP_005268227 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 367 AVNILGR 373>XP_005268226 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 367 AVNILGR 373>XP_005268225 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 367 AVNILGR 373>XP_005268224 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 367 AVNILGR 373>XP_005268223 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 +VN+LGR Sbjct: 401 AVNILGR 407>XP_005247797 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VNLLGRNS 9 V++LGRN+ Sbjct: 80 VDVLGRNA 87>NP_113603 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNLLGR 7 SVN+LG+ Sbjct: 175 SVNILGK 181Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.127 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 536,768 Number of extensions: 1139 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |