Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001166245 18 1935 XP_005258618 18 1935 NP_997208 18 1935 NP_005742 17 3301 NP_671714 17 3301 XP_006715890 17 3301 XP_005250160 17 3301 XP_005250159 17 3301 NP_001273028 17 4312 NP_005275 17 4312 NP_055928 16 5631 NP_001020466 16 5631 XP_005256618 16 5631 XP_005256617 16 5631 NP_570853 16 7355 NP_570854 16 7355 NP_000453 16 7355 NP_001273636 16 7355 NP_001273648 16 7355 NP_057117 16 7355 NP_001137502 16 7355 XP_005268328 16 7355 XP_006720739 16 7355 XP_005268327 16 7355 XP_005268326 16 7355 XP_005268324 16 7355 XP_005268325 16 7355 XP_006720738 16 7355 XP_006720737 16 7355 XP_006720736 16 7355 XP_005253056 16 7355 XP_006716639 16 7355 XP_005251007 16 7355 XP_006716637 16 7355 XP_005251005 16 7355 XP_006716636 16 7355 XP_005251004 16 7355 XP_005251003 16 7355 XP_005251002 16 7355 XP_005251001 16 7355 NP_001159349 16 7355 NP_078938 16 7355 NP_008864 15 9605 NP_000334 15 9605 NP_570855 15 9605 NP_570856 15 9605 NP_065683 15 9605 NP_001243243 15 9605 NP_001171809 15 9605 NP_001098713 15 9605 NP_065817 15 9605 NP_065803 15 9605 NP_689813 15 9605 XP_005250451 15 9605 XP_005250450 15 9605 XP_006713672 15 9605 NP_060523 15 9605>NP_001166245 Length = 716 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SVLLAAFW 8 S LLAAFW Sbjct: 187 SGLLAAFW 194>XP_005258618 Length = 682 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SVLLAAFW 8 S LLAAFW Sbjct: 187 SGLLAAFW 194>NP_997208 Length = 716 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SVLLAAFW 8 S LLAAFW Sbjct: 187 SGLLAAFW 194>NP_005742 Length = 3907 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVLLAAFWT 9 SVLLAAF T Sbjct: 3039 SVLLAAFRT 3047>NP_671714 Length = 3899 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVLLAAFWT 9 SVLLAAF T Sbjct: 3031 SVLLAAFRT 3039>XP_006715890 Length = 3860 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVLLAAFWT 9 SVLLAAF T Sbjct: 2992 SVLLAAFRT 3000>XP_005250160 Length = 3939 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVLLAAFWT 9 SVLLAAF T Sbjct: 3071 SVLLAAFRT 3079>XP_005250159 Length = 3952 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVLLAAFWT 9 SVLLAAF T Sbjct: 3084 SVLLAAFRT 3092>NP_001273028 Length = 377 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLAAFWT 9 +LLAA WT Sbjct: 202 LLLAATWT 209>NP_005275 Length = 362 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLAAFWT 9 +LLAA WT Sbjct: 187 LLLAATWT 194>NP_055928 Length = 2961 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVLLAAFWT 9 SVL + FW+ Sbjct: 958 SVLFSLFWS 966>NP_001020466 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LLAAFWT 9 +LAA WT Sbjct: 87 ILAAMWT 93>XP_005256618 Length = 2962 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVLLAAFWT 9 SVL + FW+ Sbjct: 959 SVLFSLFWS 967>XP_005256617 Length = 2966 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVLLAAFWT 9 SVL + FW+ Sbjct: 959 SVLFSLFWS 967>NP_570853 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>NP_570854 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 781 SVLIREFW 788>NP_000453 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 784 SVLIREFW 791>NP_001273636 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 235 LAAFW 239>NP_001273648 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 248 LAAFW 252>NP_057117 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 278 LAAFW 282>NP_001137502 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 692 LAAFW 696>XP_005268328 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_006720739 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_005268327 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_005268326 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_005268324 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_005268325 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_006720738 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 761 SVLIREFW 768>XP_006720737 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 781 SVLIREFW 788>XP_006720736 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVL+ FW Sbjct: 781 SVLIREFW 788>XP_005253056 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 764 LAAFW 768>XP_006716639 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 221 LAAFW 225>XP_005251007 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 265 LAAFW 269>XP_006716637 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 278 LAAFW 282>XP_005251005 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 234 LAAFW 238>XP_006716636 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 234 LAAFW 238>XP_005251004 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 248 LAAFW 252>XP_005251003 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 265 LAAFW 269>XP_005251002 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 278 LAAFW 282>XP_005251001 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 278 LAAFW 282>NP_001159349 Length = 100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 27 LAAFW 31>NP_078938 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LAAFW 8 LAAFW Sbjct: 764 LAAFW 768>NP_008864 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 LLAAFW 8 LLA FW Sbjct: 457 LLAIFW 462>NP_000334 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 LLAAFW 8 LLA FW Sbjct: 472 LLAIFW 477>NP_570855 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLAAFW 8 +LLAA W Sbjct: 418 MLLAALW 424>NP_570856 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLAAFW 8 +LLAA W Sbjct: 418 MLLAALW 424>NP_065683 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLAAFW 8 +LLAA W Sbjct: 418 MLLAALW 424>NP_001243243 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 LLAAFW 8 LLA FW Sbjct: 345 LLAIFW 350>NP_001171809 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLLAAFWT 9 +LLA WT Sbjct: 10 LLLAILWT 17>NP_001098713 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLLAAFWT 9 +LLA WT Sbjct: 10 LLLAILWT 17>NP_065817 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLLAAFWT 9 +LLA WT Sbjct: 10 LLLAILWT 17>NP_065803 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 2 VLLAAFW 8 +LL FW Sbjct: 533 ILLVVFW 539>NP_689813 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLLAAFWT 9 VLL A WT Sbjct: 222 VLLQADWT 229>XP_005250451 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLAAFW 8 +LLAA W Sbjct: 418 MLLAALW 424>XP_005250450 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VLLAAFW 8 +LLAA W Sbjct: 418 MLLAALW 424>XP_006713672 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 SVLL A W Sbjct: 445 SVLLLASW 452>NP_060523 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLLAAFW 8 S+LL A W Sbjct: 296 SILLVATW 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.129 0.469 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,022 Number of extensions: 534 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |