Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001074025 18 1482 XP_005256532 18 1482 NP_659491 18 1482 NP_001265612 17 3301 XP_006721329 17 4312 XP_006721328 17 4312 NP_001265473 16 5631 NP_000057 16 5631 NP_001265472 16 5631 NP_003217 16 5631 XP_006719742 16 5631 XP_005254043 16 5631 XP_005264851 16 5631 XP_005264850 16 5631 XP_006712984 16 5631 XP_005264847 16 5631 XP_005271223 16 5631 XP_006710936 16 5631 NP_001990 16 7355 NP_001243725 16 7355 NP_852147 16 7355 NP_852146 16 7355 NP_001248327 16 7355 NP_002551 16 7355 NP_001003675 16 7355 NP_001263178 16 7355 NP_001003674 16 7355 NP_001263180 16 7355 NP_114120 16 7355 XP_006722418 16 7355 XP_006722417 16 7355 XP_006722416 16 7355 XP_006722415 16 7355 XP_006722414 16 7355 XP_006722413 16 7355 XP_005258197 16 7355 XP_006720336 16 7355 XP_006720335 16 7355 XP_005246213 16 7355 XP_006711941 16 7355 XP_006711940 16 7355 XP_006711939 16 7355 NP_036476 16 7355 NP_001073291 15 9605 NP_000417 15 9605 NP_001074295 15 9605 NP_004548 15 9605 NP_079375 15 9605 NP_060134 15 9605 NP_775780 15 9605 NP_031382 15 9605 NP_009093 15 9605 NP_001161299 15 9605 NP_001258874 15 9605 NP_001258873 15 9605 NP_001258872 15 9605 XP_006721641 15 9605 XP_006721640 15 9605 XP_005272427 15 9605 XP_005272426 15 9605 XP_005250289 15 9605 XP_005267039 15 9605 XP_005267038 15 9605 XP_006715276 15 9605 XP_006715275 15 9605 XP_005249468 15 9605 XP_005249469 15 9605 XP_005244970 15 9605 XP_006711240 15 9605 XP_006711239 15 9605 XP_006711238 15 9605 XP_006711237 15 9605>NP_001074025 Length = 552 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SVGVSASRC 9 S+GVSA RC Sbjct: 182 SLGVSAIRC 190>XP_005256532 Length = 531 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SVGVSASRC 9 S+GVSA RC Sbjct: 161 SLGVSAIRC 169>NP_659491 Length = 620 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SVGVSASRC 9 S+GVSA RC Sbjct: 250 SLGVSAIRC 258>NP_001265612 Length = 837 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 SVG S +RC Sbjct: 36 SVGCSGARC 44>XP_006721329 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GVS SRC Sbjct: 469 GVSLSRC 475>XP_006721328 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GVS SRC Sbjct: 469 GVSLSRC 475>NP_001265473 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+GVS +C Sbjct: 333 SLGVSVGKC 341>NP_000057 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+GVS +C Sbjct: 395 SLGVSVGKC 403>NP_001265472 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+GVS +C Sbjct: 343 SLGVSVGKC 351>NP_003217 Length = 94 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGVSASRC 9 VG+SA++C Sbjct: 39 VGLSANQC 46>XP_006719742 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 SVG++ S C Sbjct: 40 SVGITGSSC 48>XP_005254043 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 SVG++ S C Sbjct: 40 SVGITGSSC 48>XP_005264851 Length = 163 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SVGVSAS 7 SVGVSAS Sbjct: 102 SVGVSAS 108>XP_005264850 Length = 171 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SVGVSAS 7 SVGVSAS Sbjct: 110 SVGVSAS 116>XP_006712984 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SVGVSAS 7 SVGVSAS Sbjct: 260 SVGVSAS 266>XP_005264847 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SVGVSAS 7 SVGVSAS Sbjct: 260 SVGVSAS 266>XP_005271223 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+GVS +C Sbjct: 432 SLGVSVGKC 440>XP_006710936 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+GVS +C Sbjct: 434 SLGVSVGKC 442>NP_001990 Length = 2912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VGVSASRC 9 VGVS S C Sbjct: 1599 VGVSRSSC 1606>NP_001243725 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 S GVS RC Sbjct: 157 SNGVSTGRC 165>NP_852147 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 218 GISASTC 224>NP_852146 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>NP_001248327 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 S GVS RC Sbjct: 141 SNGVSTGRC 149>NP_002551 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 S GVS RC Sbjct: 141 SNGVSTGRC 149>NP_001003675 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 181 GISASTC 187>NP_001263178 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 159 GISASTC 165>NP_001003674 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 199 GISASTC 205>NP_001263180 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 138 GISASTC 144>NP_114120 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 SVG SRC Sbjct: 552 SVGQEMSRC 560>XP_006722418 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_006722417 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_006722416 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_006722415 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_006722414 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_006722413 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_005258197 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SAS C Sbjct: 236 GISASTC 242>XP_006720336 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 SVG SRC Sbjct: 481 SVGQEMSRC 489>XP_006720335 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 SVG SRC Sbjct: 552 SVGQEMSRC 560>XP_005246213 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SA RC Sbjct: 128 GLSAERC 134>XP_006711941 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SA RC Sbjct: 128 GLSAERC 134>XP_006711940 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SA RC Sbjct: 128 GLSAERC 134>XP_006711939 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SA RC Sbjct: 128 GLSAERC 134>NP_036476 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 G+SA RC Sbjct: 128 GLSAERC 134>NP_001073291 Length = 3118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 GVSASRC 9 GVS RC Sbjct: 450 GVSCDRC 456>NP_000417 Length = 3122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 GVSASRC 9 GVS RC Sbjct: 450 GVSCDRC 456>NP_001074295 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+ SRC Sbjct: 384 GVTPSRC 390>NP_004548 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VGVSASRC 9 +GV SRC Sbjct: 1385 MGVDLSRC 1392>NP_079375 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+G+ AS C Sbjct: 1209 SLGILASSC 1217>NP_060134 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVGVSASRC 9 SVG + RC Sbjct: 207 SVGTNRKRC 215>NP_775780 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+AS C Sbjct: 89 GVAASHC 95>NP_031382 Length = 1761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 GVSASRC 9 GVS RC Sbjct: 1152 GVSGQRC 1158>NP_009093 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>NP_001161299 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 219 VGVTSSSC 226>NP_001258874 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>NP_001258873 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>NP_001258872 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 120 VGVTSSSC 127>XP_006721641 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+G+ AS C Sbjct: 1132 SLGILASSC 1140>XP_006721640 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVGVSASRC 9 S+G+ AS C Sbjct: 1166 SLGILASSC 1174>XP_005272427 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+ SRC Sbjct: 384 GVTPSRC 390>XP_005272426 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+ SRC Sbjct: 384 GVTPSRC 390>XP_005250289 Length = 1761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 GVSASRC 9 GVS RC Sbjct: 1152 GVSGQRC 1158>XP_005267039 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 GVSASRC 9 GVS RC Sbjct: 450 GVSCDRC 456>XP_005267038 Length = 3210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 GVSASRC 9 GVS RC Sbjct: 450 GVSCDRC 456>XP_006715276 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>XP_006715275 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>XP_005249468 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>XP_005249469 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGVSASRC 9 VGV++S C Sbjct: 205 VGVTSSSC 212>XP_005244970 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+AS C Sbjct: 89 GVAASHC 95>XP_006711240 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+AS C Sbjct: 89 GVAASHC 95>XP_006711239 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+AS C Sbjct: 89 GVAASHC 95>XP_006711238 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+AS C Sbjct: 89 GVAASHC 95>XP_006711237 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVSASRC 9 GV+AS C Sbjct: 89 GVAASHC 95Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.119 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,081 Number of extensions: 854 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |