Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 869 XP_005266703 19 869 NP_055877 18 1935 NP_001275657 18 1935 XP_006717793 18 1935 XP_005269713 18 1935 NP_001185734 17 2528 NP_001185735 17 2528 NP_542386 17 2528 NP_835260 17 3301 XP_006714523 17 3301 XP_005248329 17 3301 XP_005248328 17 3301 XP_006714522 17 3301 XP_006714521 17 3301 XP_006714520 17 3301 XP_005248327 17 3301 XP_005248326 17 3301 XP_006714519 17 3301 NP_079039 17 4312 NP_996897 17 4312 NP_001003681 17 4312 XP_006724165 17 4312 XP_006724164 17 4312 XP_006724163 17 4312 XP_005271269 17 4312 NP_001129386 17 4312 NP_001615 16 5631 XP_006718995 16 5631 XP_005274425 16 5631 XP_006718994 16 5631 XP_006718993 16 5631 XP_005274424 16 5631 XP_005274423 16 5631 XP_005266896 16 5631 NP_203753 16 5631 NP_775931 16 7355 NP_000480 16 7355 NP_002007 16 7355 NP_612114 16 7355 NP_000843 16 7355 NP_064538 16 7355 NP_001162089 16 7355 NP_001252518 16 7355 XP_006724731 16 7355 XP_006724730 16 7355 XP_005262214 16 7355 XP_005262213 16 7355 XP_006724729 16 7355 XP_005262212 16 7355 XP_005262211 16 7355 XP_005262210 16 7355 XP_005271675 16 7355 XP_006713939 16 7355 XP_006713938 16 7355 NP_006260 15 9605 NP_055938 15 9605 NP_443124 15 9605 NP_001271236 15 9605 NP_001271235 15 9605 NP_071918 15 9605 NP_001013649 15 9605 XP_006724707 15 9605 XP_005254649 15 9605 XP_005254648 15 9605 XP_005264780 15 9605 XP_006713127 15 9605 XP_006713126 15 9605 XP_005264779 15 9605 XP_005264778 15 9605 XP_005264777 15 9605 NP_001070248 15 9605>NP_443179 Length = 2170 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 S SQEGSMK Sbjct: 1468 SRSQEGSMK 1476>XP_005266703 Length = 1501 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 S SQEGSMK Sbjct: 799 SRSQEGSMK 807>NP_055877 Length = 1664 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 STSQEGSMK 9 ST+QEG++K Sbjct: 1256 STAQEGTLK 1264>NP_001275657 Length = 1542 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 STSQEGSMK 9 ST+QEG++K Sbjct: 1136 STAQEGTLK 1144>XP_006717793 Length = 1603 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 STSQEGSMK 9 ST+QEG++K Sbjct: 1195 STAQEGTLK 1203>XP_005269713 Length = 1646 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 STSQEGSMK 9 ST+QEG++K Sbjct: 1238 STAQEGTLK 1246>NP_001185734 Length = 275 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 TSQEG++K Sbjct: 187 TSQEGALK 194>NP_001185735 Length = 275 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 TSQEG++K Sbjct: 187 TSQEGALK 194>NP_542386 Length = 275 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 TSQEG++K Sbjct: 187 TSQEGALK 194>NP_835260 Length = 2839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 896 STSEEGSL 903>XP_006714523 Length = 2542 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 565 STSEEGSL 572>XP_005248329 Length = 2699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 722 STSEEGSL 729>XP_005248328 Length = 2699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 722 STSEEGSL 729>XP_006714522 Length = 2719 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 896 STSEEGSL 903>XP_006714521 Length = 2781 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 804 STSEEGSL 811>XP_006714520 Length = 2802 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 825 STSEEGSL 832>XP_005248327 Length = 2839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 896 STSEEGSL 903>XP_005248326 Length = 2873 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 896 STSEEGSL 903>XP_006714519 Length = 2873 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 STS+EGS+ Sbjct: 896 STSEEGSL 903>NP_079039 Length = 848 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSQEGSM 8 TSQEGS+ Sbjct: 146 TSQEGSL 152>NP_996897 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSQEGSM 8 TSQEGS+ Sbjct: 146 TSQEGSL 152>NP_001003681 Length = 601 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 ++S EGSMK Sbjct: 479 ASSSEGSMK 487>XP_006724165 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 ++S EGSMK Sbjct: 370 ASSSEGSMK 378>XP_006724164 Length = 603 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 ++S EGSMK Sbjct: 522 ASSSEGSMK 530>XP_006724163 Length = 644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 ++S EGSMK Sbjct: 522 ASSSEGSMK 530>XP_005271269 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSQEGSM 8 TSQEGS+ Sbjct: 146 TSQEGSL 152>NP_001129386 Length = 1503 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSQEGSMK 9 T QEGSM+ Sbjct: 803 TCQEGSMR 810>NP_001615 Length = 1723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSQEGSM 8 STSQ GS+ Sbjct: 863 STSQNGSL 870>XP_006718995 Length = 2382 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 621 TAQQGNMK 628>XP_005274425 Length = 2566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 854 TAQQGNMK 861>XP_006718994 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 854 TAQQGNMK 861>XP_006718993 Length = 2602 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 841 TAQQGNMK 848>XP_005274424 Length = 2614 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 854 TAQQGNMK 861>XP_005274423 Length = 2615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 854 TAQQGNMK 861>XP_005266896 Length = 2131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSQEGSM 8 STSQ GS+ Sbjct: 1271 STSQNGSL 1278>NP_203753 Length = 2601 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSQEGSMK 9 T+Q+G+MK Sbjct: 841 TAQQGNMK 848>NP_775931 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STSQEG 6 STSQEG Sbjct: 293 STSQEG 298>NP_000480 Length = 2492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 870 TSQEGS 875>NP_002007 Length = 4061 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STSQEG 6 STSQEG Sbjct: 2453 STSQEG 2458>NP_612114 Length = 2454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 832 TSQEGS 837>NP_000843 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSQEGSMK 9 T QEGS+K Sbjct: 38 TWQEGSLK 45>NP_064538 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STSQEGSMK 9 STSQ G M+ Sbjct: 342 STSQAGDME 350>NP_001162089 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STSQEGSMK 9 STSQ G M+ Sbjct: 291 STSQAGDME 299>NP_001252518 Length = 1032 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STSQEG 6 STSQEG Sbjct: 63 STSQEG 68>XP_006724731 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 870 TSQEGS 875>XP_006724730 Length = 2399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 777 TSQEGS 782>XP_005262214 Length = 2424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 802 TSQEGS 807>XP_005262213 Length = 2437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 815 TSQEGS 820>XP_006724729 Length = 2453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 831 TSQEGS 836>XP_005262212 Length = 2453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 831 TSQEGS 836>XP_005262211 Length = 2463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 841 TSQEGS 846>XP_005262210 Length = 2491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSQEGS 7 TSQEGS Sbjct: 869 TSQEGS 874>XP_005271675 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STSQEGSMK 9 STSQ G M+ Sbjct: 291 STSQAGDME 299>XP_006713939 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STSQEG 6 STSQEG Sbjct: 149 STSQEG 154>XP_006713938 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STSQEG 6 STSQEG Sbjct: 211 STSQEG 216>NP_006260 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 S++QEGS+ Sbjct: 397 SSNQEGSL 404>NP_055938 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 772 STSNSGSM 779>NP_443124 Length = 2459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 ST+Q+GS+ Sbjct: 397 STTQKGSL 404>NP_001271236 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 +T+QEG+ K Sbjct: 891 ATAQEGARK 899>NP_001271235 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 +T+QEG+ K Sbjct: 848 ATAQEGARK 856>NP_071918 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 +T+QEG+ K Sbjct: 1663 ATAQEGARK 1671>NP_001013649 Length = 1225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STSQEGS 7 STS EGS Sbjct: 528 STSSEGS 534>XP_006724707 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STSQEGS 7 STS EGS Sbjct: 640 STSSEGS 646>XP_005254649 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 +T+QEG+ K Sbjct: 1599 ATAQEGARK 1607>XP_005254648 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STSQEGSMK 9 +T+QEG+ K Sbjct: 1686 ATAQEGARK 1694>XP_005264780 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 424 STSNSGSM 431>XP_006713127 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 483 STSNSGSM 490>XP_006713126 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 718 STSNSGSM 725>XP_005264779 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 727 STSNSGSM 734>XP_005264778 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 739 STSNSGSM 746>XP_005264777 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STSQEGSM 8 STS GSM Sbjct: 741 STSNSGSM 748>NP_001070248 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STSQEGSM 8 ST+Q+GS+ Sbjct: 397 STTQKGSL 404Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.276 0.0922 0.205 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 559,035 Number of extensions: 782 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |