Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443157 18 1935 XP_005258543 18 1935 XP_006726249 18 1935 XP_005258542 18 1935 XP_005258541 18 1935 XP_005258540 18 1935 XP_006726248 18 1935 XP_005258539 18 1935 XP_005258538 18 1935 XP_005277301 18 1935 XP_006726369 18 1935 XP_005277300 18 1935 XP_005277299 18 1935 XP_005277298 18 1935 XP_006726368 18 1935 XP_005277297 18 1935 XP_005277296 18 1935 XP_006726331 18 1935 XP_005277122 18 1935 XP_005277120 18 1935 XP_006726330 18 1935 XP_005277119 18 1935 XP_005277118 18 1935 XP_006723060 18 1935 XP_005278309 18 1935 XP_005278307 18 1935 XP_006723059 18 1935 XP_005278306 18 1935 XP_005278305 18 1935 NP_000236 17 4312 NP_001120972 17 4312 NP_006284 17 4312 XP_006716052 17 4312 XP_006716051 17 4312 NP_008986 16 5631 NP_001244 16 5631 XP_006717660 16 5631 XP_006715352 16 5631 NP_003144 15 9605 NP_001171549 15 9605 NP_001171550 15 9605 NP_001171551 15 9605 NP_001171552 15 9605 XP_006719638 15 9605 XP_006719637 15 9605 XP_006719636 15 9605>NP_443157 Length = 800 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_005258543 Length = 800 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_006726249 Length = 819 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 222 SARGNLSGK 230>XP_005258542 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 240 SARGNLSGK 248>XP_005258541 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 240 SARGNLSGK 248>XP_005258540 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_006726248 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_005258539 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_005258538 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_005277301 Length = 800 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_006726369 Length = 819 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 222 SARGNLSGK 230>XP_005277300 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 240 SARGNLSGK 248>XP_005277299 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 240 SARGNLSGK 248>XP_005277298 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_006726368 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_005277297 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_005277296 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_006726331 Length = 819 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 222 SARGNLSGK 230>XP_005277122 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 240 SARGNLSGK 248>XP_005277120 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_006726330 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_005277119 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_005277118 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_006723060 Length = 819 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 222 SARGNLSGK 230>XP_005278309 Length = 837 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 240 SARGNLSGK 248>XP_005278307 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_006723059 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 259 SARGNLSGK 267>XP_005278306 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>XP_005278305 Length = 874 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STRANLSGK 9 S R NLSGK Sbjct: 277 SARGNLSGK 285>NP_000236 Length = 1390 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STRANLSG 8 S++ANLSG Sbjct: 102 SSKANLSG 109>NP_001120972 Length = 1408 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STRANLSG 8 S++ANLSG Sbjct: 102 SSKANLSG 109>NP_006284 Length = 890 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRANLSG 8 TRANL+G Sbjct: 377 TRANLTG 383>XP_006716052 Length = 1409 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STRANLSG 8 S++ANLSG Sbjct: 121 SSKANLSG 128>XP_006716051 Length = 1427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STRANLSG 8 S++ANLSG Sbjct: 121 SSKANLSG 128>NP_008986 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RANLSGK 9 R NLSGK Sbjct: 353 RGNLSGK 359>NP_001244 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRANLSGK 9 TRANL+ K Sbjct: 678 TRANLASK 685>XP_006717660 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RANLSGK 9 R NLSGK Sbjct: 332 RGNLSGK 338>XP_006715352 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRANLSGK 9 TRANL+ K Sbjct: 678 TRANLASK 685>NP_003144 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 253 TRASLTGR 260>NP_001171549 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 253 TRASLTGR 260>NP_001171550 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 253 TRASLTGR 260>NP_001171551 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 143 TRASLTGR 150>NP_001171552 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 143 TRASLTGR 150>XP_006719638 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 253 TRASLTGR 260>XP_006719637 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 253 TRASLTGR 260>XP_006719636 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRANLSGK 9 TRA+L+G+ Sbjct: 253 TRASLTGR 260Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.110 0.270 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,254 Number of extensions: 742 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |