Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_004710 17 4312 XP_006719755 17 4312 XP_005269287 17 4312 XP_005247479 17 4312 NP_872416 17 4312 XP_006714257 16 5631 XP_005263005 16 5631 XP_006714254 16 5631 XP_006714253 16 5631 XP_005263002 16 5631 XP_005262999 16 5631 XP_006714252 16 5631 XP_006714251 16 5631 XP_006714250 16 5631 NP_857597 16 5631 NP_078966 16 7355 NP_001185744 16 7355 NP_003632 16 7355 XP_005275558 16 7355 XP_005275391 16 7355 XP_005275259 16 7355 XP_005274965 16 7355 XP_005272815 16 7355 XP_005274885 16 7355 XP_005248836 16 7355 NP_037450 15 9605 NP_207646 15 9605 NP_061170 15 9605 XP_005275705 15 9605 XP_006725335 15 9605 XP_006725334 15 9605 XP_006725333 15 9605 XP_005275704 15 9605 XP_006725331 15 9605 XP_006725330 15 9605 XP_006725329 15 9605 XP_006725328 15 9605 XP_006723004 15 9605 XP_006720345 15 9605 XP_005268192 15 9605 XP_005268191 15 9605 XP_005272091 15 9605 XP_005272088 15 9605 XP_006712056 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 SSV PRTTM Sbjct: 1593 SSVTPRTTM 1601>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 SSV PRTTM Sbjct: 1388 SSVTPRTTM 1396>NP_004710 Length = 1463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSVIPRT 7 SSV+PRT Sbjct: 262 SSVLPRT 268>XP_006719755 Length = 1418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSVIPRT 7 SSV+PRT Sbjct: 217 SSVLPRT 223>XP_005269287 Length = 1527 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSVIPRT 7 SSV+PRT Sbjct: 326 SSVLPRT 332>XP_005247479 Length = 446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SSV+P T M Sbjct: 52 SSVLPNTNM 60>NP_872416 Length = 446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SSV+P T M Sbjct: 52 SSVLPNTNM 60>XP_006714257 Length = 4145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 4081 SIIKRTTM 4088>XP_005263005 Length = 2019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 1955 SIIKRTTM 1962>XP_006714254 Length = 2049 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 1985 SIIKRTTM 1992>XP_006714253 Length = 2069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 2005 SIIKRTTM 2012>XP_005263002 Length = 4072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 4008 SIIKRTTM 4015>XP_005262999 Length = 4147 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 4083 SIIKRTTM 4090>XP_006714252 Length = 4153 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 4089 SIIKRTTM 4096>XP_006714251 Length = 4165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 4101 SIIKRTTM 4108>XP_006714250 Length = 4190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVIPRTTM 9 S+I RTTM Sbjct: 4126 SIIKRTTM 4133>NP_857597 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVIPRTT 8 S IPRTT Sbjct: 995 SAIPRTT 1001>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSVIPRTT 8 SSVIP T+ Sbjct: 676 SSVIPETS 683Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSVIPRTT 8 SSV+ RTT Sbjct: 69 SSVVGRTT 76Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSVIPRTT 8 ++++PRTT Sbjct: 11499 NTMVPRTT 11506>NP_001185744 Length = 1773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 169 SSIISETTM 177>NP_003632 Length = 125 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVIPRTTM 9 S+++PR+T+ Sbjct: 16 STILPRSTV 24>XP_005275558 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>XP_005275391 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>XP_005275259 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>XP_005274965 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>XP_005272815 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>XP_005274885 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>XP_005248836 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSVIPRTTM 9 SS+I TTM Sbjct: 172 SSIISETTM 180>NP_037450 Length = 2229 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVIPR 6 SSVIPR Sbjct: 37 SSVIPR 42>NP_207646 Length = 2572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +SV+P TT+ Sbjct: 2259 TSVLPTTTV 2267>NP_061170 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +S+ PRTT+ Sbjct: 104 NSLTPRTTV 112>XP_005275705 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 75 SSVTPRT 81>XP_006725335 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 134 SSVTPRT 140>XP_006725334 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 141 SSVTPRT 147>XP_006725333 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 163 SSVTPRT 169>XP_005275704 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 192 SSVTPRT 198>XP_006725331 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 489 SSVTPRT 495>XP_006725330 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 547 SSVTPRT 553>XP_006725329 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 518 SSVTPRT 524>XP_006725328 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSVIPRT 7 SSV PRT Sbjct: 547 SSVTPRT 553>XP_006723004 Length = 6443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSVIPRTT 8 ++++PRTT Sbjct: 3413 NTMVPRTT 3420>XP_006720345 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +SV+P TT+ Sbjct: 1209 TSVLPTTTV 1217>XP_005268192 Length = 1602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +SV+P TT+ Sbjct: 1289 TSVLPTTTV 1297>XP_005268191 Length = 2572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +SV+P TT+ Sbjct: 2259 TSVLPTTTV 2267>XP_005272091 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +S+ PRTT+ Sbjct: 104 NSLTPRTTV 112>XP_005272088 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSVIPRTTM 9 +S+ PRTT+ Sbjct: 92 NSLTPRTTV 100>XP_006712056 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSVIPRTT 8 +SV+PR T Sbjct: 71 TSVVPRPT 78Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.118 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 586,013 Number of extensions: 815 Number of successful extensions: 48 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |