Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 509 NP_001128360 17 3301 NP_005727 17 3301 NP_056460 17 4312 NP_001265360 17 4312 NP_001449 16 5631 NP_001120959 16 5631 NP_004550 16 5631 NP_056162 16 5631 NP_001138898 16 5631 NP_001254542 16 5631 NP_001254539 16 5631 NP_001254543 16 5631 NP_722561 16 5631 NP_001254538 16 5631 NP_001254540 16 5631 NP_001254541 16 5631 NP_003642 16 5631 XP_005262209 16 5631 XP_006724727 16 5631 XP_006715973 16 5631 XP_006714302 16 5631 XP_005263127 16 5631 XP_006711316 16 5631 XP_005245114 16 5631 XP_005245113 16 5631 XP_006711315 16 5631 XP_005245112 16 5631 XP_006711314 16 5631 NP_057066 16 5631 NP_061908 16 5631 NP_001866 16 7355 NP_004332 16 7355 NP_001116105 16 7355 NP_001116106 16 7355 NP_689860 16 7355 NP_002544 16 7355 XP_005254276 16 7355 XP_005254275 16 7355 XP_006720491 16 7355 XP_006720490 16 7355 XP_006720489 16 7355 XP_006720488 16 7355 XP_005254273 16 7355 XP_006720487 16 7355 XP_005254272 16 7355 XP_006720486 16 7355 XP_005254271 16 7355 XP_005254270 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 NP_976035 15 9605 NP_071902 15 9605 NP_001001740 15 9605 NP_001273573 15 9605 NP_073619 15 9605 NP_689801 15 9605 NP_001032629 15 9605 XP_006724571 15 9605 XP_005274635 15 9605 XP_005268737 15 9605 XP_006719250 15 9605 XP_005249548 15 9605 XP_006711552 15 9605 XP_006711551 15 9605 XP_006711550 15 9605 XP_005245505 15 9605 XP_005245504 15 9605>NP_004251 Length = 1208 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 SSVEFD+VK Sbjct: 983 SSVEFDMVK 991>NP_001128360 Length = 1358 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVEFDIV 8 S+EFDIV Sbjct: 489 SIEFDIV 495>NP_005727 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSVEFDIVK 9 SS EF+IVK Sbjct: 207 SSSEFEIVK 215>NP_056460 Length = 243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++FD+VK Sbjct: 162 ASLQFDLVK 170>NP_001265360 Length = 243 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++FD+VK Sbjct: 162 ASLQFDLVK 170>NP_001449 Length = 2725 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SSVEFDIVK 9 + ++FDI+K Sbjct: 815 ADIDFDIIK 823>NP_001120959 Length = 2692 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SSVEFDIVK 9 + ++FDI+K Sbjct: 815 ADIDFDIIK 823>NP_004550 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVEFDIVK 9 +VEFD+V+ Sbjct: 108 TVEFDVVE 115>NP_056162 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EFDIVK 9 EFDIVK Sbjct: 428 EFDIVK 433>NP_001138898 Length = 303 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVEFDIVK 9 +VEFD+V+ Sbjct: 140 TVEFDVVE 147>NP_001254542 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 89 SSVEFDEFK 97>NP_001254539 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 167 SSVEFDEFK 175>NP_001254543 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 53 SSVEFDEFK 61>NP_722561 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 167 SSVEFDEFK 175>NP_001254538 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 187 SSVEFDEFK 195>NP_001254540 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 184 SSVEFDEFK 192>NP_001254541 Length = 397 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 35 SSVEFDEFK 43>NP_003642 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVEFDIVK 9 +VEFD+V+ Sbjct: 140 TVEFDVVE 147>XP_005262209 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 SSVE+D+++ Sbjct: 229 SSVEYDMLR 237>XP_006724727 Length = 463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 SSVE+D+++ Sbjct: 315 SSVEYDMLR 323>XP_006715973 Length = 2632 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SSVEFDIVK 9 + ++FDI+K Sbjct: 815 ADIDFDIIK 823>XP_006714302 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SVEFDIV 8 S+EFD++ Sbjct: 105 SIEFDVI 111>XP_005263127 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SVEFDIV 8 S+EFD++ Sbjct: 105 SIEFDVI 111>XP_006711316 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 167 SSVEFDEFK 175>XP_005245114 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 167 SSVEFDEFK 175>XP_005245113 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 167 SSVEFDEFK 175>XP_006711315 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 167 SSVEFDEFK 175>XP_005245112 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 187 SSVEFDEFK 195>XP_006711314 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SSVEFD K Sbjct: 190 SSVEFDEFK 198>NP_057066 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVEFDIVK 9 +VEFD+V+ Sbjct: 143 TVEFDVVE 150>NP_061908 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SVEFDIV 8 S+EFD++ Sbjct: 105 SIEFDVI 111>NP_001866 Length = 1500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 988 SSVEFD 993>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 947 SSVEFD 952>NP_001116105 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 994 SSVEFD 999>NP_001116106 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 537 SSVEFD 542>NP_689860 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>NP_002544 Length = 435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVEFDIVK 9 +V FDI+K Sbjct: 422 TVNFDIIK 429>XP_005254276 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>XP_005254275 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 203 TSIDFNIIK 211>XP_006720491 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 237 TSIDFNIIK 245>XP_006720490 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 254 TSIDFNIIK 262>XP_006720489 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 290 TSIDFNIIK 298>XP_006720488 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>XP_005254273 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 303 TSIDFNIIK 311>XP_006720487 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>XP_005254272 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 325 TSIDFNIIK 333>XP_006720486 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>XP_005254271 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>XP_005254270 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SSVEFDIVK 9 +S++F+I+K Sbjct: 337 TSIDFNIIK 345>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 884 SSVEFD 889>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 884 SSVEFD 889>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 947 SSVEFD 952>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 947 SSVEFD 952>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SSVEFD Sbjct: 947 SSVEFD 952>NP_976035 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSVEFDIV 8 +S+EFD+V Sbjct: 59 NSLEFDMV 66>NP_071902 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 425 SSIEFD 430>NP_001001740 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 401 SSIEFD 406>NP_001273573 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 185 SSIEFD 190>NP_073619 Length = 1183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EFDIVK 9 EFD+VK Sbjct: 3 EFDLVK 8>NP_689801 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVEFDIV 8 S EFD+V Sbjct: 742 STEFDVV 748>NP_001032629 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SS E D++K Sbjct: 5 SSSEIDVIK 13>XP_006724571 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SS E D++K Sbjct: 5 SSSEIDVIK 13>XP_005274635 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSVEFDIVK 9 SS E D++K Sbjct: 5 SSSEIDVIK 13>XP_005268737 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVEFDIV 8 S EFD+V Sbjct: 625 STEFDVV 631>XP_006719250 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EFDIVK 9 EFD+VK Sbjct: 3 EFDLVK 8>XP_005249548 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSVEFDIV 8 +S+EFD+V Sbjct: 59 NSLEFDMV 66>XP_006711552 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 114 SSIEFD 119>XP_006711551 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 425 SSIEFD 430>XP_006711550 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 402 SSIEFD 407>XP_005245505 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 405 SSIEFD 410>XP_005245504 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSVEFD 6 SS+EFD Sbjct: 421 SSIEFD 426Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.132 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 388,171 Number of extensions: 442 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |