Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 665 NP_444254 19 665 NP_444253 19 665 NP_444255 19 665 XP_005247551 19 665 XP_005247550 19 665 XP_006713712 19 665 XP_005247549 19 665 NP_443137 17 3301 XP_006712292 17 3301 XP_005246323 17 3301 XP_005246322 17 3301 XP_006712291 17 3301 XP_005246320 17 3301 NP_005969 17 4312 NP_056445 16 5631 XP_006712474 16 5631 NP_001106849 16 7355 NP_060663 16 7355 NP_001243544 16 7355 NP_064615 16 7355 NP_001129243 16 7355 NP_055516 16 7355 NP_001180418 16 7355 NP_001185619 16 7355 NP_001035754 16 7355 NP_002942 16 7355 XP_006723915 16 7355 XP_006723914 16 7355 XP_005260548 16 7355 XP_006723913 16 7355 XP_006723912 16 7355 NP_001159758 15 9605 NP_064596 15 9605 NP_001159761 15 9605 NP_001159755 15 9605 NP_001159760 15 9605 NP_001159759 15 9605 NP_000411 15 9605 NP_690621 15 9605 NP_690620 15 9605 NP_690619 15 9605 NP_001091873 15 9605 NP_001091872 15 9605 NP_065778 15 9605 NP_002812 15 9605 NP_001257327 15 9605 XP_005277047 15 9605 XP_005277046 15 9605 XP_005277045 15 9605 XP_005261180 15 9605 XP_005261178 15 9605 XP_005250052 15 9605 XP_005250051 15 9605 XP_005250050 15 9605>NP_444256 Length = 1794 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 878 SPQQVDFRS 886>NP_444254 Length = 1845 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 878 SPQQVDFRS 886>NP_444253 Length = 1914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 947 SPQQVDFRS 955>NP_444255 Length = 1863 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 947 SPQQVDFRS 955>XP_005247551 Length = 1855 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 888 SPQQVDFRS 896>XP_005247550 Length = 1856 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 957 SPQQVDFRS 965>XP_006713712 Length = 1923 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 957 SPQQVDFRS 965>XP_005247549 Length = 1924 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 S QQVDFRS Sbjct: 957 SPQQVDFRS 965>NP_443137 Length = 1092 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_006712292 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_005246323 Length = 1069 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_005246322 Length = 1084 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_006712291 Length = 1086 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_005246320 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>NP_005969 Length = 97 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSQQVDFR 8 S QQVDF+ Sbjct: 66 SDQQVDFQ 73>NP_056445 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 SSQ +DF S Sbjct: 487 SSQTIDFSS 495>XP_006712474 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 SSQ +DF S Sbjct: 371 SSQTIDFSS 379>NP_001106849 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 SSQ+ DF S Sbjct: 971 SSQEEDFNS 979>NP_060663 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 SSQ+ DF S Sbjct: 911 SSQEEDFNS 919>NP_001243544 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQQVDFRS 9 SQQ+ FRS Sbjct: 86 SQQLGFRS 93>NP_064615 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SQQVDFR 8 SQ++DFR Sbjct: 189 SQELDFR 195>NP_001129243 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 140 SQQADLRS 147>NP_055516 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 +SQQ DF S Sbjct: 217 ASQQTDFPS 225>NP_001180418 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 +SQQ DF S Sbjct: 217 ASQQTDFPS 225>NP_001185619 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SQQVDFR 8 SQ++DFR Sbjct: 189 SQELDFR 195>NP_001035754 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SQQVDFR 8 SQ++DFR Sbjct: 189 SQELDFR 195>NP_002942 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 172 SQQADLRS 179>XP_006723915 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 188 SQQADLRS 195>XP_006723914 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 188 SQQADLRS 195>XP_005260548 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 172 SQQADLRS 179>XP_006723913 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 188 SQQADLRS 195>XP_006723912 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQVDFRS 9 SQQ D RS Sbjct: 188 SQQADLRS 195>NP_001159758 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SQQVDFRS 9 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_064596 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SQQVDFRS 9 +QQ+DF++ Sbjct: 322 NQQIDFQA 329>NP_001159761 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SQQVDFRS 9 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_001159755 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SQQVDFRS 9 +QQ+DF++ Sbjct: 330 NQQIDFQA 337>NP_001159760 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SQQVDFRS 9 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_001159759 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SQQVDFRS 9 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_000411 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 668 SPQQIFFRS 676>NP_690621 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QQVDFR 8 QQ+DFR Sbjct: 783 QQLDFR 788>NP_690620 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QQVDFR 8 QQ+DFR Sbjct: 709 QQLDFR 714>NP_690619 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QQVDFR 8 QQ+DFR Sbjct: 799 QQLDFR 804>NP_001091873 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 SS+QV+F S Sbjct: 649 SSEQVNFDS 657>NP_001091872 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 SS+QV+F S Sbjct: 850 SSEQVNFDS 858>NP_065778 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 SS+QV+F S Sbjct: 850 SSEQVNFDS 858>NP_002812 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QQVDFR 8 QQ+DFR Sbjct: 839 QQLDFR 844>NP_001257327 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QQVDFR 8 QQ+DFR Sbjct: 847 QQLDFR 852>XP_005277047 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 324 SPQQIFFRS 332>XP_005277046 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 359 SPQQIFFRS 367>XP_005277045 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 680 SPQQIFFRS 688>XP_005261180 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 SS+QV+F S Sbjct: 649 SSEQVNFDS 657>XP_005261178 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSQQVDFRS 9 SS+QV+F S Sbjct: 850 SSEQVNFDS 858>XP_005250052 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 324 SPQQIFFRS 332>XP_005250051 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 359 SPQQIFFRS 367>XP_005250050 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSQQVDFRS 9 S QQ+ FRS Sbjct: 680 SPQQIFFRS 688Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.115 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,449 Number of extensions: 487 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |