Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1935 NP_001087241 18 1935 XP_006714101 18 1935 XP_005265799 18 1935 XP_005265798 18 1935 XP_005265797 18 1935 NP_001138619 17 4312 NP_001138618 17 4312 NP_001138620 17 4312 NP_004373 17 4312 NP_060453 17 4312 XP_005257554 17 4312 NP_001180360 16 5631 NP_057051 16 5631 NP_036543 16 5631 NP_065816 16 5631 XP_005270795 16 5631 XP_006710573 16 5631 XP_006710572 16 5631 XP_006710571 16 5631 XP_006710570 16 5631 XP_006710569 16 5631 XP_006710568 16 5631 XP_006710567 16 5631 XP_006710566 16 5631 XP_005245859 16 5631 NP_055559 15 9605 NP_001127853 15 9605 NP_001265644 15 9605 NP_001265643 15 9605 NP_112598 15 9605 XP_005265673 15 9605 XP_005265672 15 9605 XP_005265671 15 9605 XP_005265670 15 9605 XP_005265669 15 9605 XP_006713493 15 9605 XP_006713492 15 9605 XP_005265668 15 9605>NP_000213 Length = 976 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSARVN SG Sbjct: 278 SSARVNDSG 286>NP_001087241 Length = 972 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSARVN SG Sbjct: 278 SSARVNDSG 286>XP_006714101 Length = 526 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSARVN SG Sbjct: 279 SSARVNDSG 287>XP_005265799 Length = 973 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSARVN SG Sbjct: 279 SSARVNDSG 287>XP_005265798 Length = 976 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSARVN SG Sbjct: 279 SSARVNDSG 287>XP_005265797 Length = 977 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSARVN SG Sbjct: 279 SSARVNDSG 287>NP_001138619 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SARVNYS 8 +ARVNYS Sbjct: 54 AARVNYS 60>NP_001138618 Length = 444 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SARVNYS 8 +ARVNYS Sbjct: 94 AARVNYS 100>NP_001138620 Length = 401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SARVNYS 8 +ARVNYS Sbjct: 94 AARVNYS 100>NP_004373 Length = 415 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SARVNYS 8 +ARVNYS Sbjct: 94 AARVNYS 100>NP_060453 Length = 446 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSARVNYSG 9 ++AR+N+SG Sbjct: 305 ATARLNFSG 313>XP_005257554 Length = 364 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSARVNYSG 9 ++AR+N+SG Sbjct: 223 ATARLNFSG 231>NP_001180360 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSARVNYS 8 SSA +NYS Sbjct: 493 SSAELNYS 500>NP_057051 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSARVNYS 8 SSA +NYS Sbjct: 493 SSAELNYS 500>NP_036543 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSARVNYS 8 SSA +NYS Sbjct: 438 SSAELNYS 445>NP_065816 Length = 5183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_005270795 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSARVNYS 8 SSA +NYS Sbjct: 469 SSAELNYS 476>XP_006710573 Length = 5177 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710572 Length = 5188 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710571 Length = 5194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710570 Length = 5195 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710569 Length = 5212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710568 Length = 5221 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710567 Length = 5222 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_006710566 Length = 5222 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>XP_005245859 Length = 5223 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SARVNYSG 9 + R+NYSG Sbjct: 1872 NVRMNYSG 1879>NP_055559 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 725 SSARGSFSG 733>NP_001127853 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 747 SSARGSFSG 755>NP_001265644 Length = 86 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSARVNYSG 9 SSA V+Y G Sbjct: 48 SSAYVSYGG 56>NP_001265643 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSARVNYSG 9 SSA V+Y G Sbjct: 84 SSAYVSYGG 92>NP_112598 Length = 5088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 ++ARV +SG Sbjct: 554 ATARVTFSG 562>XP_005265673 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 611 SSARGSFSG 619>XP_005265672 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 611 SSARGSFSG 619>XP_005265671 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 725 SSARGSFSG 733>XP_005265670 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 747 SSARGSFSG 755>XP_005265669 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 747 SSARGSFSG 755>XP_006713493 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 747 SSARGSFSG 755>XP_006713492 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 747 SSARGSFSG 755>XP_005265668 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSARVNYSG 9 SSAR ++SG Sbjct: 747 SSARGSFSG 755Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.111 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 412,600 Number of extensions: 427 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |