Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004251                                                              19     665
NP_055572                                                              19     869
NP_001120822                                                           17    4312
NP_005457                                                              17    4312
NP_001271140                                                           17    4312
NP_001271139                                                           17    4312
NP_001271138                                                           17    4312
XP_005245971                                                           17    4312
NP_060108                                                              17    4312
NP_001002858                                                           16    5631
NP_001129487                                                           16    5631
NP_004030                                                              16    5631
NP_001002857                                                           16    5631
NP_001161206                                                           16    5631
NP_001153777                                                           16    5631
NP_079136                                                              16    5631
NP_001161205                                                           16    5631
NP_065175                                                              16    5631
NP_057079                                                              16    5631
NP_079133                                                              16    7355
NP_056190                                                              16    7355
NP_859066                                                              16    7355
NP_955749                                                              16    7355
NP_001171890                                                           16    7355
NP_001139138                                                           16    7355
NP_001171891                                                           16    7355
NP_001139139                                                           16    7355
NP_036333                                                              16    7355
NP_055883                                                              16    7355
NP_001035242                                                           16    7355
NP_001165908                                                           16    7355
NP_001165909                                                           16    7355
NP_001138612                                                           16    7355
NP_001138611                                                           16    7355
NP_619647                                                              16    7355
XP_005245006                                                           16    7355
XP_006711262                                                           16    7355
XP_005245003                                                           16    7355
NP_005115                                                              15    9605
NP_001265138                                                           15    9605
NP_004629                                                              15    9605
NP_542417                                                              15    9605
NP_001104502                                                           15    9605
NP_660302                                                              15    9605
NP_001104501                                                           15    9605
NP_001104503                                                           15    9605
NP_004435                                                              15    9605
NP_001264044                                                           15    9605
NP_974197                                                              15    9605
NP_974198                                                              15    9605
NP_005707                                                              15    9605
NP_974199                                                              15    9605
NP_065863                                                              15    9605
NP_055325                                                              15    9605
NP_149015                                                              15    9605
NP_663320                                                              15    9605
NP_001070730                                                           15    9605
NP_001363                                                              15    9605
NP_892120                                                              15    9605
NP_775899                                                              15    9605
NP_974223                                                              15    9605
XP_005276207                                                           15    9605
XP_005276200                                                           15    9605
XP_006726175                                                           15    9605
XP_006726174                                                           15    9605
XP_006726087                                                           15    9605
XP_006726086                                                           15    9605
XP_006725985                                                           15    9605
XP_006725897                                                           15    9605
XP_006725896                                                           15    9605
XP_006725787                                                           15    9605
XP_006725786                                                           15    9605
XP_006725571                                                           15    9605
XP_006725570                                                           15    9605
XP_005261709                                                           15    9605
XP_006723391                                                           15    9605
XP_005260057                                                           15    9605
XP_006722866                                                           15    9605
XP_006722865                                                           15    9605
XP_005260058                                                           15    9605
XP_006721530                                                           15    9605
XP_006721529                                                           15    9605
XP_006721528                                                           15    9605
XP_006715989                                                           15    9605
XP_006715354                                                           15    9605
XP_005249564                                                           15    9605
XP_006715353                                                           15    9605
XP_006715254                                                           15    9605
XP_003846549                                                           15    9605
XP_006711265                                                           15    9605
XP_006711264                                                           15    9605
XP_005245004                                                           15    9605
XP_006711263                                                           15    9605
NP_061881                                                              15    9605
NP_078799                                                              15    9605
NP_001182064                                                           15    9605
>NP_004251
          Length = 1208

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SRQGSVLDY 9
           SRQGSV DY
Sbjct: 97  SRQGSVPDY 105
>NP_055572
          Length = 1016

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SRQGSVLDY 9
           + QGSVLDY
Sbjct: 504 NNQGSVLDY 512
>NP_001120822
          Length = 208

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  QGSVLDY 9
          QGSVLD+
Sbjct: 24 QGSVLDH 30
>NP_005457
          Length = 246

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  GSVLDY 9
          GSVLDY
Sbjct: 27 GSVLDY 32
>NP_001271140
          Length = 257

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  GSVLDY 9
          GSVLDY
Sbjct: 27 GSVLDY 32
>NP_001271139
          Length = 181

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  GSVLDY 9
          GSVLDY
Sbjct: 27 GSVLDY 32
>NP_001271138
          Length = 253

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  GSVLDY 9
          GSVLDY
Sbjct: 27 GSVLDY 32
>XP_005245971
          Length = 208

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  QGSVLDY 9
          QGSVLD+
Sbjct: 24 QGSVLDH 30
>NP_060108
          Length = 208

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  QGSVLDY 9
          QGSVLD+
Sbjct: 24 QGSVLDH 30
>NP_001002858
          Length = 357

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +  GSV+DY
Sbjct: 198 AEDGSVIDY 206
>NP_001129487
          Length = 339

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +  GSV+DY
Sbjct: 180 AEDGSVIDY 188
>NP_004030
          Length = 339

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +  GSV+DY
Sbjct: 180 AEDGSVIDY 188
>NP_001002857
          Length = 339

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +  GSV+DY
Sbjct: 180 AEDGSVIDY 188
>NP_001161206
          Length = 1093

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           SR G V++Y
Sbjct: 496 SRSGDVIEY 504
>NP_001153777
          Length = 473

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SRQGSVLDY 9
          SRQG+V  Y
Sbjct: 67 SRQGTVAGY 75
>NP_079136
          Length = 449

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SRQGSVLDY 9
          SRQG+V  Y
Sbjct: 43 SRQGTVAGY 51
>NP_001161205
          Length = 923

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           SR G V++Y
Sbjct: 326 SRSGDVIEY 334
>NP_065175
          Length = 1063

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           SR G V++Y
Sbjct: 466 SRSGDVIEY 474
>NP_057079
          Length = 288

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           SR GS+ DY
Sbjct: 264 SRTGSLSDY 272
>NP_079133
          Length = 1844

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1    SRQGSVLDY 9
            +RQ S+++Y
Sbjct: 1789 NRQASIIEY 1797
>NP_056190
          Length = 929

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 715 GSVIDY 720
>NP_859066
          Length = 693

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SRQGSVLD 8
           SR+G +LD
Sbjct: 199 SRRGGILD 206
>NP_955749
          Length = 884

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 715 GSVIDY 720
>NP_001171890
          Length = 742

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 213 GSVIDY 218
>NP_001139138
          Length = 1192

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QG +LDY
Sbjct: 409 QGEMLDY 415
>NP_001171891
          Length = 359

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 213 GSVIDY 218
>NP_001139139
          Length = 1179

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QG +LDY
Sbjct: 420 QGEMLDY 426
>NP_036333
          Length = 1203

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QG +LDY
Sbjct: 420 QGEMLDY 426
>NP_055883
          Length = 708

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 179 GSVIDY 184
>NP_001035242
          Length = 325

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 179 GSVIDY 184
>NP_001165908
          Length = 784

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 255 GSVIDY 260
>NP_001165909
          Length = 401

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GSV+DY
Sbjct: 255 GSVIDY 260
>NP_001138612
          Length = 514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  QGSVLDY 9
          QG V+DY
Sbjct: 91 QGDVVDY 97
>NP_001138611
          Length = 514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  QGSVLDY 9
          QG V+DY
Sbjct: 91 QGDVVDY 97
>NP_619647
          Length = 643

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SRQGSVLD 8
           S +GSVLD
Sbjct: 337 SAEGSVLD 344
>XP_005245006
          Length = 585

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  SRQGSVLD 8
          SR+G +LD
Sbjct: 86 SRRGGILD 93
>XP_006711262
          Length = 689

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SRQGSVLD 8
           SR+G +LD
Sbjct: 190 SRRGGILD 197
>XP_005245003
          Length = 698

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SRQGSVLD 8
           SR+G +LD
Sbjct: 199 SRRGGILD 206
>NP_005115
          Length = 1475

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RQGSVLD 8
           ++GSVLD
Sbjct: 604 KEGSVLD 610
>NP_001265138
          Length = 1506

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RQGSVLD 8
           ++GSVLD
Sbjct: 635 KEGSVLD 641
>NP_004629
          Length = 2157

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>NP_542417
          Length = 2157

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>NP_001104502
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QGS+ DY
Sbjct: 195 QGSLYDY 201
>NP_660302
          Length = 493

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QGS+ DY
Sbjct: 275 QGSLYDY 281
>NP_001104501
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QGS+ DY
Sbjct: 225 QGSLYDY 231
>NP_001104503
          Length = 336

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   QGSVLDY 9
           QGS+ DY
Sbjct: 118 QGSLYDY 124
>NP_004435
          Length = 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           G+VLDY
Sbjct: 462 GAVLDY 467
>NP_001264044
          Length = 4516

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    QGSVLDY 9
            QG++ DY
Sbjct: 2446 QGTIFDY 2452
>NP_974197
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   RQGSVLDY 9
           ++GSV+D+
Sbjct: 161 KEGSVIDH 168
>NP_974198
          Length = 236

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  RQGSVLDY 9
          ++GSV+D+
Sbjct: 64 KEGSVIDH 71
>NP_005707
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   RQGSVLDY 9
           ++GSV+D+
Sbjct: 161 KEGSVIDH 168
>NP_974199
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   RQGSVLDY 9
           ++GSV+D+
Sbjct: 161 KEGSVIDH 168
>NP_065863
          Length = 2047

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 562 SRQGSV 567
>NP_055325
          Length = 4935

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    GSVLDY 9
            GS++DY
Sbjct: 2234 GSIIDY 2239
>NP_149015
          Length = 5142

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    GSVLDY 9
            GS++DY
Sbjct: 2234 GSIIDY 2239
>NP_663320
          Length = 487

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RQGSVLD 8
           RQG V+D
Sbjct: 310 RQGEVID 316
>NP_001070730
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RQGSVLD 8
           RQG V+D
Sbjct: 223 RQGEVID 229
>NP_001363
          Length = 4486

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    QGSVLDY 9
            QG++ DY
Sbjct: 2414 QGTIFDY 2420
>NP_892120
          Length = 520

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RQGSVLD 8
           RQG V+D
Sbjct: 343 RQGEVID 349
>NP_775899
          Length = 4462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    QGSVLDY 9
            QG++ DY
Sbjct: 2391 QGTIFDY 2397
>NP_974223
          Length = 236

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  RQGSVLDY 9
          ++GSV+D+
Sbjct: 64 KEGSVIDH 71
>XP_005276207
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +RQ S LD+
Sbjct: 252 NRQSSALDF 260
>XP_005276200
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +RQ S LD+
Sbjct: 252 NRQSSALDF 260
>XP_006726175
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>XP_006726174
          Length = 2156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1484 SRQGSV 1489
>XP_006726087
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>XP_006726086
          Length = 2156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1484 SRQGSV 1489
>XP_006725985
          Length = 2156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1484 SRQGSV 1489
>XP_006725897
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>XP_006725896
          Length = 2156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1484 SRQGSV 1489
>XP_006725787
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>XP_006725786
          Length = 2156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1484 SRQGSV 1489
>XP_006725571
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>XP_006725570
          Length = 2156

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1484 SRQGSV 1489
>XP_005261709
          Length = 285

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GS+LDY
Sbjct: 102 GSLLDY 107
>XP_006723391
          Length = 329

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 142 SRQGSV 147
>XP_005260057
          Length = 2113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 562 SRQGSV 567
>XP_006722866
          Length = 1778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 258 SRQGSV 263
>XP_006722865
          Length = 2078

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 562 SRQGSV 567
>XP_005260058
          Length = 2082

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 562 SRQGSV 567
>XP_006721530
          Length = 2746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    QGSVLDY 9
            QG++ DY
Sbjct: 2414 QGTIFDY 2420
>XP_006721529
          Length = 2817

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    QGSVLDY 9
            QG++ DY
Sbjct: 2414 QGTIFDY 2420
>XP_006721528
          Length = 3869

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    QGSVLDY 9
            QG++ DY
Sbjct: 2414 QGTIFDY 2420
>XP_006715989
          Length = 5148

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    GSVLDY 9
            GS++DY
Sbjct: 2234 GSIIDY 2239
>XP_006715354
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RQGSVLD 8
           ++GSVLD
Sbjct: 604 KEGSVLD 610
>XP_005249564
          Length = 1457

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RQGSVLD 8
           ++GSVLD
Sbjct: 586 KEGSVLD 592
>XP_006715353
          Length = 1469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RQGSVLD 8
           ++GSVLD
Sbjct: 598 KEGSVLD 604
>XP_006715254
          Length = 2086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    SRQGSV 6
            SRQGSV
Sbjct: 1485 SRQGSV 1490
>XP_003846549
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SRQGSVLDY 9
           +RQ S LD+
Sbjct: 252 NRQSSALDF 260
>XP_006711265
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  RQGSVLDY 9
          R+GS  DY
Sbjct: 89 RRGSCFDY 96
>XP_006711264
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  RQGSVLDY 9
          R+GS  DY
Sbjct: 89 RRGSCFDY 96
>XP_005245004
          Length = 615

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RQGSVLDY 9
           R+GS  DY
Sbjct: 112 RRGSCFDY 119
>XP_006711263
          Length = 620

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RQGSVLDY 9
           R+GS  DY
Sbjct: 112 RRGSCFDY 119
>NP_061881
          Length = 463

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   GSVLDY 9
           GS+LDY
Sbjct: 280 GSLLDY 285
>NP_078799
          Length = 775

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SRQGSVLDY 9
           SR+G+ L+Y
Sbjct: 714 SREGANLEY 722
>NP_001182064
          Length = 329

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SRQGSV 6
           SRQGSV
Sbjct: 142 SRQGSV 147
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.312    0.131    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 573,859
Number of extensions: 1186
Number of successful extensions: 96
Number of sequences better than 10000.0: 96
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 96
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package