Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 20 299 NP_861969 20 299 NP_000259 20 299 NP_861968 20 299 NP_861966 20 299 NP_861970 20 299 NP_861546 20 299 NP_861967 20 299 NP_002435 18 1135 XP_005262326 18 1135 NP_003370 17 2528 NP_001104547 17 2528 NP_001247421 17 2528 NP_001247423 17 2528 NP_001247422 17 2528 NP_002897 17 2528 XP_006715624 17 2528 NP_001188405 17 4312 NP_113634 17 4312 NP_001274324 17 4312 XP_005258421 17 4312 XP_006712547 17 4312 NP_001269569 16 5631 NP_001269572 16 5631 NP_071931 16 5631 NP_899236 16 7355 NP_001714 16 7355 NP_056363 16 7355 NP_001138241 16 7355 NP_001138242 16 7355 NP_001231509 16 7355 NP_003487 16 7355 NP_001153889 16 7355 NP_110403 16 7355 NP_001153890 16 7355 NP_689414 16 7355 XP_006723941 16 7355 XP_006715232 16 7355 XP_005249383 16 7355 XP_005249382 16 7355 XP_005249381 16 7355 XP_005249380 16 7355 XP_005249379 16 7355 XP_005249377 16 7355 XP_005249376 16 7355 XP_005249375 16 7355 XP_005249374 16 7355 XP_005249373 16 7355 XP_005249372 16 7355 XP_005249371 16 7355 XP_005249370 16 7355 XP_005249369 16 7355 XP_005249368 16 7355 XP_005249367 16 7355 XP_006711002 16 7355 NP_001277007 15 9605 NP_000450 15 9605 NP_001277006 15 9605 NP_001020414 15 9605 NP_001020413 15 9605 NP_001560 15 9605 NP_057191 15 9605 NP_056473 15 9605 NP_003747 15 9605 NP_065823 15 9605 XP_005274725 15 9605 XP_005255669 15 9605 XP_005251620 15 9605 XP_005251618 15 9605 XP_006714540 15 9605 XP_006713468 15 9605 XP_005265616 15 9605>NP_057502 Length = 590 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 248 NRLTPKISF 256>NP_861969 Length = 507 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 165 NRLTPKISF 173>NP_000259 Length = 595 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 248 NRLTPKISF 256>NP_861968 Length = 507 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 165 NRLTPKISF 173>NP_861966 Length = 548 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 206 NRLTPKISF 214>NP_861970 Length = 590 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 248 NRLTPKISF 256>NP_861546 Length = 590 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 248 NRLTPKISF 256>NP_861967 Length = 549 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRLTPKISF 9 +RLTPKISF Sbjct: 207 NRLTPKISF 215>NP_002435 Length = 577 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 RLTPKI F Sbjct: 233 RLTPKIGF 240>XP_005262326 Length = 578 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 RLTPKI F Sbjct: 234 RLTPKIGF 241>NP_003370 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001104547 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001247421 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001247423 Length = 447 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 97 KLTPKIGF 104>NP_001247422 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_002897 Length = 583 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 233 KLTPKIGF 240>XP_006715624 Length = 543 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 +LTPKI F Sbjct: 233 KLTPKIGF 240>NP_001188405 Length = 130 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 +RLTPKI Sbjct: 63 ARLTPKI 69>NP_113634 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 +RLTPKI Sbjct: 63 ARLTPKI 69>NP_001274324 Length = 1688 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SRLTPKIS 8 SRL+P+IS Sbjct: 1203 SRLSPRIS 1210>XP_005258421 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 +RLTPKI Sbjct: 69 ARLTPKI 75>XP_006712547 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SRLTPKIS 8 SRL+P+IS Sbjct: 1200 SRLSPRIS 1207>NP_001269569 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 R+ PKIS+ Sbjct: 320 RINPKISY 327>NP_001269572 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 R+ PKIS+ Sbjct: 320 RINPKISY 327>NP_071931 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLTPKISF 9 R+ PKIS+ Sbjct: 320 RINPKISY 327>NP_899236 Length = 5497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 545 SRLTPSVT 552>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 219 SRLTPSVT 226>NP_056363 Length = 5171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 219 SRLTPSVT 226>NP_001138241 Length = 5675 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 723 SRLTPSVT 730>NP_001138242 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 585 SRLTPSVT 592>NP_001231509 Length = 3859 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RLTPKIS 8 RLTP IS Sbjct: 3730 RLTPNIS 3736>NP_003487 Length = 3830 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RLTPKIS 8 RLTP IS Sbjct: 3701 RLTPNIS 3707>NP_001153889 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 S+LTPK+ Sbjct: 389 SKLTPKL 395>NP_110403 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 S+LTPK+ Sbjct: 390 SKLTPKL 396>NP_001153890 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 S+LTPK+ Sbjct: 315 SKLTPKL 321>NP_689414 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 SRL+PK+ Sbjct: 290 SRLSPKV 296>XP_006723941 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 S+LTPK+ Sbjct: 339 SKLTPKL 345>XP_006715232 Length = 7498 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 545 SRLTPSVT 552>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_005249382 Length = 5732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_005249381 Length = 7281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 219 SRLTPSVT 226>XP_005249380 Length = 7607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 545 SRLTPSVT 552>XP_005249379 Length = 7633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 571 SRLTPSVT 578>XP_005249377 Length = 7640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 578 SRLTPSVT 585>XP_005249376 Length = 7647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 585 SRLTPSVT 592>XP_005249375 Length = 7680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 618 SRLTPSVT 625>XP_005249374 Length = 7709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_005249373 Length = 7723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 661 SRLTPSVT 668>XP_005249372 Length = 7785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 723 SRLTPSVT 730>XP_005249371 Length = 7788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_005249370 Length = 7794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_005249369 Length = 7797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 735 SRLTPSVT 742>XP_005249368 Length = 7812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_005249367 Length = 7818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRLTPKIS 8 SRLTP ++ Sbjct: 756 SRLTPSVT 763>XP_006711002 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SRLTPKI 7 SRL+PK+ Sbjct: 290 SRLSPKV 296>NP_001277007 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 R+TPKI Sbjct: 200 RMTPKI 205>NP_000450 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 R+TPKI Sbjct: 347 RMTPKI 352>NP_001277006 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 R+TPKI Sbjct: 304 RMTPKI 309>NP_001020414 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 RLTPK+ Sbjct: 351 RLTPKL 356>NP_001020413 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 RLTPK+ Sbjct: 351 RLTPKL 356>NP_001560 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 RLTPK+ Sbjct: 351 RLTPKL 356>NP_057191 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPKISF 9 TPKI+F Sbjct: 499 TPKINF 504>NP_056473 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 RLTPK+ Sbjct: 164 RLTPKL 169>NP_003747 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 RLTPK+ Sbjct: 168 RLTPKL 173>NP_065823 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SRLTPKISF 9 +++ PKIS+ Sbjct: 350 AKIVPKISY 358>XP_005274725 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 RLTPK+ Sbjct: 377 RLTPKL 382>XP_005255669 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RLTPKISF 9 RL P ISF Sbjct: 20 RLAPVISF 27>XP_005251620 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 R+TPKI Sbjct: 304 RMTPKI 309>XP_005251618 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RLTPKI 7 R+TPKI Sbjct: 347 RMTPKI 352>XP_006714540 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TPKISF 9 TPKI+F Sbjct: 455 TPKINF 460>XP_006713468 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTPKISF 9 +TPKIS+ Sbjct: 1 MTPKISW 7>XP_005265616 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTPKISF 9 +TPKIS+ Sbjct: 56 MTPKISW 62Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.134 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 652,500 Number of extensions: 633 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |