Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 22 134 NP_000240 22 134 NP_001161089 22 134 NP_001004056 17 3301 NP_892027 17 3301 NP_599152 17 3301 NP_443166 17 3301 XP_006713943 17 3301 XP_005248019 17 3301 XP_005248018 17 3301 XP_006713942 17 3301 XP_005248014 17 3301 XP_006711207 17 3301 NP_001244073 17 4312 NP_001244074 17 4312 NP_689651 17 4312 NP_085911 17 4312 NP_004390 17 4312 XP_005268810 17 4312 XP_005268809 17 4312 XP_006719115 17 4312 XP_005253390 17 4312 XP_006719114 17 4312 XP_006719113 17 4312 XP_006719112 17 4312 XP_006719111 17 4312 XP_006719110 17 4312 XP_006719109 17 4312 XP_006719108 17 4312 XP_006719107 17 4312 XP_005253388 17 4312 XP_006719106 17 4312 XP_006719105 17 4312 XP_006719104 17 4312 NP_036416 17 4312 NP_001276332 16 5631 NP_001276333 16 5631 NP_001276334 16 5631 NP_071757 16 5631 NP_115901 16 5631 XP_006718008 16 5631 XP_005270098 16 5631 XP_005270092 16 5631 XP_006718007 16 5631 NP_689968 16 5631 NP_001010898 16 7355 XP_006710706 16 7355 NP_116145 15 9605 NP_859422 15 9605 NP_001154992 15 9605 NP_056986 15 9605 NP_006339 15 9605 NP_001094832 15 9605 NP_001269802 15 9605 NP_056503 15 9605 XP_005251019 15 9605 XP_005251017 15 9605 XP_005251016 15 9605 XP_005251014 15 9605 XP_005251013 15 9605>NP_001245200 Length = 687 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SREMIEIGC 9 SRE+IEIGC Sbjct: 225 SRELIEIGC 233>NP_000240 Length = 756 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SREMIEIGC 9 SRE+IEIGC Sbjct: 225 SRELIEIGC 233>NP_001161089 Length = 658 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SREMIEIGC 9 SRE+IEIGC Sbjct: 127 SRELIEIGC 135>NP_001004056 Length = 546 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 483 EMIESGC 489>NP_892027 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 515 EMIESGC 521>NP_599152 Length = 887 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SREMIEIGC 9 ++EMI +GC Sbjct: 366 NQEMIALGC 374>NP_443166 Length = 791 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SREMIEIGC 9 ++EMI +GC Sbjct: 366 NQEMIALGC 374>XP_006713943 Length = 367 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 304 EMIESGC 310>XP_005248019 Length = 367 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 304 EMIESGC 310>XP_005248018 Length = 384 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 321 EMIESGC 327>XP_006713942 Length = 433 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 370 EMIESGC 376>XP_005248014 Length = 532 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EMIEIGC 9 EMIE GC Sbjct: 469 EMIESGC 475>XP_006711207 Length = 791 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SREMIEIGC 9 ++EMI +GC Sbjct: 366 NQEMIALGC 374>NP_001244073 Length = 970 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>NP_001244074 Length = 880 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 148 SREMLETG 155>NP_689651 Length = 970 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>NP_085911 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>NP_004390 Length = 856 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>XP_005268810 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SREMIEIGC 9 S EM+ IGC Sbjct: 981 SLEMVLIGC 989>XP_005268809 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SREMIEIGC 9 S EM+ IGC Sbjct: 999 SLEMVLIGC 1007>XP_006719115 Length = 845 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_005253390 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_006719114 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_006719113 Length = 967 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_006719112 Length = 969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 148 SREMLETG 155>XP_006719111 Length = 969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 148 SREMLETG 155>XP_006719110 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>XP_006719109 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>XP_006719108 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>XP_006719107 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 174 SREMLETG 181>XP_005253388 Length = 1006 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_006719106 Length = 1018 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_006719105 Length = 1031 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>XP_006719104 Length = 1031 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SREMIEIG 8 SREM+E G Sbjct: 210 SREMLETG 217>NP_036416 Length = 1083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SREMIEIGC 9 S EM+ IGC Sbjct: 1059 SLEMVLIGC 1067>NP_001276332 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 696 RELLELSC 703>NP_001276333 Length = 871 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 580 RELLELSC 587>NP_001276334 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 739 RELLELSC 746>NP_071757 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 739 RELLELSC 746>NP_115901 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++EI C Sbjct: 358 RELLEIKC 365>XP_006718008 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 375 RELLELSC 382>XP_005270098 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 538 RELLELSC 545>XP_005270092 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 581 RELLELSC 588>XP_006718007 Length = 1050 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE++E+ C Sbjct: 759 RELLELSC 766>NP_689968 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 SRE++E+G Sbjct: 58 SREVLELG 65>NP_001010898 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 REMIEIGC 9 +EM +GC Sbjct: 493 KEMFTVGC 500>XP_006710706 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 REMIEIGC 9 +EM +GC Sbjct: 493 KEMFTVGC 500>NP_116145 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SREMIEIGC 9 +RE+ +GC Sbjct: 92 TRELAALGC 100>NP_859422 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE+++ GC Sbjct: 57 RELLQDGC 64>NP_001154992 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE+++ GC Sbjct: 57 RELLQDGC 64>NP_056986 Length = 2799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 1977 TRELLELG 1984>NP_006339 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 REMIEIGC 9 RE+++ GC Sbjct: 57 RELLQDGC 64>NP_001094832 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 S+E++E+G Sbjct: 221 SKEVVELG 228>NP_001269802 Length = 2798 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 1977 TRELLELG 1984>NP_056503 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SREMIEI 7 SREM+E+ Sbjct: 148 SREMLEL 154>XP_005251019 Length = 1811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 987 TRELLELG 994>XP_005251017 Length = 2792 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 1971 TRELLELG 1978>XP_005251016 Length = 2795 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 1971 TRELLELG 1978>XP_005251014 Length = 2800 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 1977 TRELLELG 1984>XP_005251013 Length = 2801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SREMIEIG 8 +RE++E+G Sbjct: 1977 TRELLELG 1984Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.141 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 437,042 Number of extensions: 951 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |