Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 18 1935 XP_005271924 18 1935 XP_005271923 18 1935 NP_001035810 17 2528 NP_000393 17 2528 XP_005274715 17 2528 XP_005274714 17 2528 NP_000882 17 4312 NP_000048 16 5631 NP_001274176 16 5631 NP_001274175 16 5631 NP_113663 16 5631 XP_005263558 16 5631 XP_005275805 16 5631 NP_001009899 16 7355 NP_005498 16 7355 NP_002461 16 7355 NP_001136087 16 7355 NP_009120 16 7355 NP_002378 16 7355 NP_001078846 16 7355 NP_001136086 16 7355 NP_001803 16 7355 NP_005683 16 7355 XP_006721591 16 7355 XP_006715887 16 7355 XP_005249988 16 7355 XP_005272048 16 7355 XP_006714680 16 7355 XP_006714128 16 7355 XP_006714127 16 7355 XP_005247266 16 7355 XP_005247265 16 7355 XP_006712034 16 7355 XP_005264284 16 7355 XP_005264283 16 7355 XP_005264282 16 7355 NP_001136088 16 7355 NP_056067 16 7355 NP_001121649 15 9605 NP_001796 15 9605 NP_001121648 15 9605 NP_000452 15 9605 NP_001239563 15 9605 NP_689845 15 9605 NP_689658 15 9605 NP_659482 15 9605 NP_031391 15 9605 NP_002087 15 9605 XP_005248180 15 9605 XP_006714090 15 9605 XP_005265482 15 9605 XP_005265481 15 9605 XP_005265480 15 9605 XP_006713381 15 9605 XP_005265478 15 9605 XP_006713380 15 9605 XP_005265477 15 9605 NP_003206 15 9605>NP_001261 Length = 1710 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SRDLAKKK 8 SRDLAKK+ Sbjct: 1314 SRDLAKKE 1321>XP_005271924 Length = 1710 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SRDLAKKK 8 SRDLAKK+ Sbjct: 1314 SRDLAKKE 1321>XP_005271923 Length = 1798 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SRDLAKKK 8 SRDLAKK+ Sbjct: 1314 SRDLAKKE 1321>NP_001035810 Length = 515 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S DLAKKK+ Sbjct: 40 SGDLAKKKI 48>NP_000393 Length = 545 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S DLAKKK+ Sbjct: 70 SGDLAKKKI 78>XP_005274715 Length = 516 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S DLAKKK+ Sbjct: 40 SGDLAKKKI 48>XP_005274714 Length = 546 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S DLAKKK+ Sbjct: 70 SGDLAKKKI 78>NP_000882 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SRDLAKKK 8 +RDLA+KK Sbjct: 358 ARDLAEKK 365>NP_000048 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRD A KKL Sbjct: 131 SRDTALKKL 139>NP_001274176 Length = 1286 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRD A KKL Sbjct: 131 SRDTALKKL 139>NP_001274175 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRD A KKL Sbjct: 131 SRDTALKKL 139>NP_113663 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL +KKL Sbjct: 791 RDLLRKKL 798>XP_005263558 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL +KKL Sbjct: 770 RDLLRKKL 777>XP_005275805 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRD AKK L Sbjct: 219 SRDNAKKSL 227>NP_001009899 Length = 2245 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 1010 DLAKKK 1015>NP_005498 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 S+D KKKL Sbjct: 120 SKDAIKKKL 128>NP_002461 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 204 DLAKKK 209>NP_001136087 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 738 DLAKKK 743>NP_009120 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 4 DLAKKK 9>NP_002378 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL +KKL Sbjct: 46 RDLLEKKL 53>NP_001078846 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL +KKL Sbjct: 236 RDLLEKKL 243>NP_001136086 Length = 1196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 738 DLAKKK 743>NP_001803 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 624 DLAKKK 629>NP_005683 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 4 DLAKKK 9>XP_006721591 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 204 DLAKKK 209>XP_006715887 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 4 DLAKKK 9>XP_005249988 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 4 DLAKKK 9>XP_005272048 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL +KKL Sbjct: 46 RDLLEKKL 53>XP_006714680 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL +KKL Sbjct: 197 RDLLEKKL 204>XP_006714128 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 411 DLAKKK 416>XP_006714127 Length = 935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 624 DLAKKK 629>XP_005247266 Length = 2189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 954 DLAKKK 959>XP_005247265 Length = 2211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 976 DLAKKK 981>XP_006712034 Length = 1195 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 773 DLAKKK 778>XP_005264284 Length = 1196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 738 DLAKKK 743>XP_005264283 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 773 DLAKKK 778>XP_005264282 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 773 DLAKKK 778>NP_001136088 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 738 DLAKKK 743>NP_056067 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKK 8 DLAKKK Sbjct: 773 DLAKKK 778>NP_001121649 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>NP_001796 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 SRD AK+++ Sbjct: 221 SRDKAKRRI 229>NP_001121648 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>NP_000452 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>NP_001239563 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>NP_689845 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDLAKKK 8 +DLAK+K Sbjct: 549 KDLAKRK 555>NP_689658 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRDLAKKK 8 ++DLAKK+ Sbjct: 617 AKDLAKKE 624>NP_659482 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 +RD+AK +L Sbjct: 275 ARDIAKNQL 283>NP_031391 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 +RD+ KK+L Sbjct: 551 NRDILKKEL 559>NP_002087 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RDLAKKKL 9 RDL+ KK+ Sbjct: 49 RDLSNKKI 56>XP_005248180 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRDL KKL Sbjct: 18 SRDLWVKKL 26>XP_006714090 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRDL KKL Sbjct: 18 SRDLWVKKL 26>XP_005265482 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>XP_005265481 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>XP_005265480 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>XP_006713381 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>XP_005265478 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>XP_006713380 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 183 SKRLAKRKL 191>XP_005265477 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKKL 9 S+ LAK+KL Sbjct: 198 SKRLAKRKL 206>NP_003206 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SRDLAKKKL 9 SRDL KKL Sbjct: 98 SRDLWVKKL 106Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.125 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 564,539 Number of extensions: 1392 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |