Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 19 869 NP_660274 17 4312 NP_001271197 17 4312 NP_001271198 17 4312 NP_001271196 17 4312 NP_001271195 17 4312 NP_689585 16 5631 NP_001159872 16 5631 NP_005355 16 5631 NP_001159873 16 5631 NP_861523 16 5631 NP_000589 16 7355 NP_001013416 16 7355 NP_005794 16 7355 NP_003706 16 7355 NP_001276978 16 7355 NP_065801 16 7355 XP_006726135 16 7355 XP_005275560 16 7355 XP_005275559 16 7355 XP_006726034 16 7355 XP_005275393 16 7355 XP_005275392 16 7355 XP_006725735 16 7355 XP_005274967 16 7355 XP_005274966 16 7355 XP_006725528 16 7355 XP_005272817 16 7355 XP_005272816 16 7355 XP_006715010 16 7355 XP_005248838 16 7355 XP_005248837 16 7355 XP_006714460 16 7355 XP_006714459 16 7355 NP_073600 15 9605 NP_001128567 15 9605 NP_001071160 15 9605 NP_001071159 15 9605 NP_079016 15 9605 NP_001071158 15 9605 NP_063946 15 9605 NP_001137446 15 9605 NP_000172 15 9605 NP_001275500 15 9605 NP_057540 15 9605 NP_660090 15 9605 NP_001275499 15 9605 NP_001275497 15 9605 NP_001275496 15 9605 NP_001275495 15 9605 NP_001275494 15 9605 NP_001275493 15 9605 NP_001273024 15 9605 NP_065695 15 9605 NP_001273023 15 9605 NP_001275498 15 9605 XP_006718976 15 9605 XP_005277781 15 9605 XP_005277780 15 9605 XP_005250354 15 9605 XP_006715954 15 9605 XP_005250252 15 9605 XP_005250251 15 9605>NP_000312 Length = 928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 SQRYKL VR Sbjct: 443 SQRYKLGVR 451>NP_660274 Length = 163 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 +QRY+ EVR Sbjct: 89 AQRYRNEVR 97>NP_001271197 Length = 118 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 +QRY+ EVR Sbjct: 65 AQRYRNEVR 73>NP_001271198 Length = 139 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 +QRY+ EVR Sbjct: 65 AQRYRNEVR 73>NP_001271196 Length = 115 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 +QRY+ EVR Sbjct: 41 AQRYRNEVR 49>NP_001271195 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 +QRY+ EVR Sbjct: 89 AQRYRNEVR 97>NP_689585 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RYKLEVR 9 RY++EVR Sbjct: 1380 RYRMEVR 1386>NP_001159872 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SQRYKLE 7 SQRYK E Sbjct: 7 SQRYKAE 13>NP_005355 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SQRYKLE 7 SQRYK E Sbjct: 7 SQRYKAE 13>NP_001159873 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SQRYKLE 7 SQRYK E Sbjct: 7 SQRYKAE 13>NP_861523 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRYKLEVR 9 SQR+KL+ R Sbjct: 164 SQRHKLQPR 172>NP_000589 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 SQRYK++ Sbjct: 183 SQRYKVD 189>NP_001013416 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 SQRYK++ Sbjct: 189 SQRYKVD 195>NP_005794 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 289 AERYKLE 295>NP_003706 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQRYKLEV 8 S++Y+LEV Sbjct: 50 SKKYRLEV 57>NP_001276978 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQRYKLEV 8 S++Y+LEV Sbjct: 50 SKKYRLEV 57>NP_065801 Length = 1204 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 +QRY+LE Sbjct: 26 TQRYRLE 32>XP_006726135 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 236 AERYKLE 242>XP_005275560 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 241 AERYKLE 247>XP_005275559 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 289 AERYKLE 295>XP_006726034 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 236 AERYKLE 242>XP_005275393 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 241 AERYKLE 247>XP_005275392 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 289 AERYKLE 295>XP_006725735 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 236 AERYKLE 242>XP_005274967 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 241 AERYKLE 247>XP_005274966 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 289 AERYKLE 295>XP_006725528 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 236 AERYKLE 242>XP_005272817 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 241 AERYKLE 247>XP_005272816 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 289 AERYKLE 295>XP_006715010 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 236 AERYKLE 242>XP_005248838 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 241 AERYKLE 247>XP_005248837 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRYKLE 7 ++RYKLE Sbjct: 289 AERYKLE 295>XP_006714460 Length = 966 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQRYKLEV 8 S++Y+LEV Sbjct: 50 SKKYRLEV 57>XP_006714459 Length = 969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQRYKLEV 8 S++Y+LEV Sbjct: 50 SKKYRLEV 57>NP_073600 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QRYKLEVR 9 Q Y+LEV+ Sbjct: 263 QEYELEVK 270>NP_001128567 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QRYKLEVR 9 Q Y+LEV+ Sbjct: 263 QEYELEVK 270>NP_001071160 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 228 QRYRLE 233>NP_001071159 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 235 QRYRLE 240>NP_079016 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 406 QRYRLE 411>NP_001071158 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 399 QRYRLE 404>NP_063946 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRYKLEV 8 SQR +LEV Sbjct: 164 SQRLRLEV 171>NP_001137446 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRYKLEV 8 SQR +LEV Sbjct: 164 SQRLRLEV 171>NP_000172 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRYKLEVR 9 S +KLEVR Sbjct: 253 SNLFKLEVR 261>NP_001275500 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 187 QRWKLQVQ 194>NP_057540 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>NP_660090 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRYKLEV 8 SQR+ LEV Sbjct: 413 SQRHHLEV 420>NP_001275499 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 165 QRWKLQVQ 172>NP_001275497 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>NP_001275496 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>NP_001275495 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>NP_001275494 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>NP_001275493 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>NP_001273024 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 103 QRWKLQVQ 110>NP_065695 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 177 QRWKLQVQ 184>NP_001273023 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 103 QRWKLQVQ 110>NP_001275498 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRYKLEVR 9 QR+KL+V+ Sbjct: 162 QRWKLQVQ 169>XP_006718976 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 406 QRYRLE 411>XP_005277781 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 399 QRYRLE 404>XP_005277780 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QRYKLE 7 QRY+LE Sbjct: 406 QRYRLE 411>XP_005250354 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRYKLEVR 9 S +KLEVR Sbjct: 253 SNLFKLEVR 261>XP_006715954 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRYKLEV 8 SQR+ LEV Sbjct: 249 SQRHHLEV 256>XP_005250252 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRYKLEV 8 SQR+ LEV Sbjct: 413 SQRHHLEV 420>XP_005250251 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRYKLEV 8 SQR+ LEV Sbjct: 413 SQRHHLEV 420Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.131 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,604 Number of extensions: 838 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |