Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 XP_006710601 17 2528 XP_005270757 17 2528 XP_006710599 17 2528 XP_006710588 17 2528 XP_006710587 17 2528 XP_006710586 17 2528 XP_006710585 17 2528 XP_005270755 17 2528 XP_006710584 17 2528 XP_005270754 17 2528 XP_005270753 17 2528 XP_006710583 17 2528 XP_005270752 17 2528 XP_006710582 17 2528 XP_005270751 17 2528 NP_071748 17 3301 XP_006712749 17 3301 XP_006712748 17 3301 XP_005246823 17 3301 XP_005246822 17 3301 XP_005246821 17 3301 XP_005246820 17 3301 NP_002723 17 3301 NP_001258761 16 7355 NP_066954 16 7355 NP_821067 16 7355 NP_079027 16 7355 NP_001180326 16 7355 NP_001026890 16 7355 NP_821070 16 7355 NP_821068 16 7355 XP_005263279 16 7355 XP_005263159 16 7355 NP_006333 15 9605 NP_001015892 15 9605 NP_056046 15 9605 NP_076971 15 9605 NP_003178 15 9605 NP_057059 15 9605 XP_005262199 15 9605 XP_006718233 15 9605 XP_005247987 15 9605 XP_006713918 15 9605 XP_005247986 15 9605 XP_006713566 15 9605 XP_005271245 15 9605 XP_005271244 15 9605 XP_005271243 15 9605 XP_005271241 15 9605 NP_001861 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQMVEFP L Sbjct: 1858 SQMVEFPVL 1866>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQMVEFP L Sbjct: 1653 SQMVEFPVL 1661>XP_006710601 Length = 4720 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_005270757 Length = 5460 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710599 Length = 5656 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710588 Length = 7614 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710587 Length = 7645 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710586 Length = 7645 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710585 Length = 7657 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_005270755 Length = 7663 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710584 Length = 7686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_005270754 Length = 7694 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_005270753 Length = 7700 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710583 Length = 7702 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_005270752 Length = 7717 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_006710582 Length = 7720 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>XP_005270751 Length = 7723 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SQMVEFP 7 SQ+VEFP Sbjct: 161 SQLVEFP 167>NP_071748 Length = 414 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 161 VEFPFL 166>XP_006712749 Length = 267 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 14 VEFPFL 19>XP_006712748 Length = 414 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 161 VEFPFL 166>XP_005246823 Length = 414 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 161 VEFPFL 166>XP_005246822 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 172 VEFPFL 177>XP_005246821 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 172 VEFPFL 177>XP_005246820 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VEFPFL 9 VEFPFL Sbjct: 172 VEFPFL 177>NP_002723 Length = 351 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 Q ++FPFL Sbjct: 97 QAIDFPFL 104>NP_001258761 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQ+++ P+L Sbjct: 196 SQLIDHPYL 204>NP_066954 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQ+++ P+L Sbjct: 225 SQLIDHPYL 233>NP_821067 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQ+++ P+L Sbjct: 225 SQLIDHPYL 233>NP_079027 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 ++VEFP L Sbjct: 221 KLVEFPLL 228>NP_001180326 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQ+++ P+L Sbjct: 190 SQLIDHPYL 198>NP_001026890 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 ++VEFP L Sbjct: 308 KLVEFPLL 315>NP_821070 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQ+++ P+L Sbjct: 183 SQLIDHPYL 191>NP_821068 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 SQ+++ P+L Sbjct: 260 SQLIDHPYL 268>XP_005263279 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 ++VEFP L Sbjct: 308 KLVEFPLL 315>XP_005263159 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVEFPFL 9 MVE PFL Sbjct: 1 MVETPFL 7>NP_006333 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 +++VEF FL Sbjct: 598 AKLVEFDFL 606>NP_001015892 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMVEFPF 8 +QM+EF F Sbjct: 37 NQMLEFAF 44>NP_056046 Length = 1436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MVEFPFL 9 +VEFP++ Sbjct: 1050 LVEFPYV 1056>NP_076971 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 +++EFP L Sbjct: 164 EIIEFPIL 171>NP_003178 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMVEFPF 8 +QM+EF F Sbjct: 37 NQMLEFAF 44>NP_057059 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMVEFPF 8 +QM+EF F Sbjct: 37 NQMLEFAF 44>XP_005262199 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMVEFPF 8 +QM+EF F Sbjct: 76 NQMLEFAF 83>XP_006718233 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MVEFPFL 9 +VEFP++ Sbjct: 396 LVEFPYV 402>XP_005247987 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 +++VEF FL Sbjct: 238 AKLVEFDFL 246>XP_006713918 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 +++VEF FL Sbjct: 586 AKLVEFDFL 594>XP_005247986 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQMVEFPFL 9 +++VEF FL Sbjct: 598 AKLVEFDFL 606>XP_006713566 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMVEFPF 8 SQM+ FP+ Sbjct: 307 SQMLLFPY 314>XP_005271245 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 +++EFP L Sbjct: 86 EIIEFPIL 93>XP_005271244 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 +++EFP L Sbjct: 86 EIIEFPIL 93>XP_005271243 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 +++EFP L Sbjct: 164 EIIEFPIL 171>XP_005271241 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QMVEFPFL 9 +++EFP L Sbjct: 141 EIIEFPIL 148>NP_001861 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMVEFPF 8 SQM+ FP+ Sbjct: 307 SQMLLFPY 314Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.145 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 516,907 Number of extensions: 667 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |