Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066124 20 509 XP_006717999 20 509 NP_775901 17 3301 XP_005266736 17 3301 XP_006722498 17 3301 XP_006722497 17 3301 NP_055861 16 5631 NP_055730 16 5631 NP_001242982 16 5631 NP_001043 16 5631 XP_006717495 16 5631 XP_006717492 16 5631 XP_006717491 16 5631 XP_006717489 16 5631 XP_006717488 16 5631 XP_006717487 16 5631 XP_006717486 16 5631 XP_005272230 16 5631 XP_005272229 16 5631 XP_005272228 16 5631 XP_006710290 16 5631 NP_005814 16 7355 NP_001170826 16 7355 NP_001278296 16 7355 NP_001278295 16 7355 NP_000066 16 7355 NP_055986 16 7355 NP_001257869 16 7355 XP_005255255 16 7355 XP_005255254 16 7355 XP_005255252 16 7355 XP_005255091 16 7355 XP_006720900 16 7355 XP_006720899 16 7355 NP_001789 15 9605 NP_439892 15 9605 NP_001181926 15 9605 NP_001014437 15 9605 NP_001742 15 9605 NP_644802 15 9605 NP_001258594 15 9605 NP_055535 15 9605 XP_006725193 15 9605 XP_006725192 15 9605 XP_006719294 15 9605 XP_006718404 15 9605 XP_006718403 15 9605 XP_005270358 15 9605 NP_001138947 15 9605 NP_001135780 15 9605>NP_066124 Length = 1114 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKLMD Sbjct: 1102 SPSAAKLMD 1110>XP_006717999 Length = 1207 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKLMD Sbjct: 1195 SPSAAKLMD 1203>NP_775901 Length = 2226 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SP+VA L+D Sbjct: 1821 SPTVASLLD 1829>XP_005266736 Length = 1314 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SP+VA L+D Sbjct: 909 SPTVASLLD 917>XP_006722498 Length = 2059 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SP+VA L+D Sbjct: 1822 SPTVASLLD 1830>XP_006722497 Length = 2227 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SP+VA L+D Sbjct: 1822 SPTVASLLD 1830>NP_055861 Length = 2677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SPSVAKL 7 SPSVAK+ Sbjct: 1952 SPSVAKI 1958>NP_055730 Length = 1710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>NP_001242982 Length = 1709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>NP_001043 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 PSVAKLMD 9 PSVAKL++ Sbjct: 160 PSVAKLIN 167>XP_006717495 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717492 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717491 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717489 Length = 1945 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717488 Length = 2031 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717487 Length = 2071 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717486 Length = 2072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PSVAKLM 8 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_005272230 Length = 2706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SPSVAKL 7 SPSVAK+ Sbjct: 1952 SPSVAKI 1958>XP_005272229 Length = 2706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SPSVAKL 7 SPSVAK+ Sbjct: 1952 SPSVAKI 1958>XP_005272228 Length = 2706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SPSVAKL 7 SPSVAK+ Sbjct: 1952 SPSVAKI 1958>XP_006710290 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SVAKLMD 9 SVAK+MD Sbjct: 502 SVAKMMD 508>NP_005814 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSVAKLMD 9 SP VA L+D Sbjct: 408 SPQVATLID 416>NP_001170826 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSVAKLMD 9 SP VA L+D Sbjct: 408 SPQVATLID 416>NP_001278296 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SPSVAKLM 8 SP AKLM Sbjct: 119 SPETAKLM 126>NP_001278295 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SPSVAKLM 8 SP AKLM Sbjct: 213 SPETAKLM 220>NP_000066 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V +LMD Sbjct: 69 PNVVRLMD 76>NP_055986 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKL++ Sbjct: 224 SPSSAKLLN 232>NP_001257869 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKL++ Sbjct: 210 SPSSAKLLN 218>XP_005255255 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKL++ Sbjct: 50 SPSSAKLLN 58>XP_005255254 Length = 1051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKL++ Sbjct: 150 SPSSAKLLN 158>XP_005255252 Length = 1124 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPSVAKLMD 9 SPS AKL++ Sbjct: 224 SPSSAKLLN 232>XP_005255091 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSVAKLMD 9 SP VA L+D Sbjct: 407 SPQVATLID 415>XP_006720900 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSVAKLMD 9 SP VA L+D Sbjct: 408 SPQVATLID 416>XP_006720899 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSVAKLMD 9 SP VA L+D Sbjct: 408 SPQVATLID 416>NP_001789 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P++ KL+D Sbjct: 61 PNIVKLLD 68>NP_439892 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P++ KL+D Sbjct: 61 PNIVKLLD 68>NP_001181926 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 719 PTVVKLVD 726>NP_001014437 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 719 PTVVKLVD 726>NP_001742 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 636 PTVVKLVD 643>NP_644802 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 636 PTVVKLVD 643>NP_001258594 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P++ K+MD Sbjct: 181 PTILKMMD 188>NP_055535 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P++ KL+D Sbjct: 89 PNIVKLLD 96>XP_006725193 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 626 PTVVKLVD 633>XP_006725192 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 719 PTVVKLVD 726>XP_006719294 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SPSVAK 6 SPSVAK Sbjct: 1948 SPSVAK 1953>XP_006718404 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 626 PTVVKLVD 633>XP_006718403 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P+V KL+D Sbjct: 719 PTVVKLVD 726>XP_005270358 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PSVAKLMD 9 P++ KL+D Sbjct: 89 PNIVKLLD 96>NP_001138947 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SPSVAK 6 SPSVAK Sbjct: 1948 SPSVAK 1953>NP_001135780 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SPSVAKL 7 SP VAKL Sbjct: 530 SPGVAKL 536Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.118 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 651,085 Number of extensions: 1146 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |