Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_115927                                                              21     229
NP_001273283                                                           18    1935
NP_683766                                                              18    1935
NP_001273284                                                           18    1935
NP_001008895                                                           17    4312
NP_001265442                                                           17    4312
NP_001265443                                                           17    4312
NP_003580                                                              17    4312
NP_031399                                                              16    5631
NP_001157472                                                           16    5631
NP_001098547                                                           16    5631
NP_001157471                                                           16    5631
NP_003671                                                              16    5631
NP_001255968                                                           16    5631
NP_005232                                                              16    5631
NP_112190                                                              16    5631
NP_065076                                                              16    5631
NP_001192123                                                           16    5631
NP_004982                                                              16    5631
NP_001098548                                                           16    5631
XP_006723662                                                           16    5631
XP_005260825                                                           16    5631
XP_006723661                                                           16    5631
XP_005248564                                                           16    5631
XP_006713600                                                           16    5631
XP_005247283                                                           16    5631
XP_005247282                                                           16    5631
XP_005247281                                                           16    5631
XP_005247280                                                           16    5631
XP_005247278                                                           16    5631
XP_005247276                                                           16    5631
XP_005247277                                                           16    5631
XP_006713599                                                           16    5631
XP_005247273                                                           16    5631
XP_005247272                                                           16    5631
XP_005247271                                                           16    5631
XP_005247270                                                           16    5631
NP_005900                                                              16    5631
NP_000088                                                              16    7355
NP_115921                                                              16    7355
NP_001623                                                              16    7355
NP_775921                                                              16    7355
NP_036553                                                              16    7355
XP_005267222                                                           16    7355
XP_005247182                                                           16    7355
XP_005246496                                                           16    7355
XP_006712061                                                           16    7355
XP_006712060                                                           16    7355
XP_006712059                                                           16    7355
XP_006712058                                                           16    7355
NP_112603                                                              16    7355
NP_059990                                                              15    9605
NP_001269973                                                           15    9605
NP_055062                                                              15    9605
NP_055805                                                              15    9605
NP_001269972                                                           15    9605
NP_919277                                                              15    9605
NP_056295                                                              15    9605
NP_004897                                                              15    9605
NP_001257460                                                           15    9605
XP_006723798                                                           15    9605
XP_006720343                                                           15    9605
XP_006720167                                                           15    9605
XP_006720166                                                           15    9605
XP_005267550                                                           15    9605
XP_005267549                                                           15    9605
XP_005267548                                                           15    9605
XP_006720165                                                           15    9605
XP_006720164                                                           15    9605
XP_006720163                                                           15    9605
XP_006720162                                                           15    9605
XP_006720161                                                           15    9605
XP_005266493                                                           15    9605
XP_005266492                                                           15    9605
XP_006714485                                                           15    9605
XP_005263418                                                           15    9605
XP_005263417                                                           15    9605
XP_006714484                                                           15    9605
XP_005263416                                                           15    9605
XP_006714483                                                           15    9605
XP_005263415                                                           15    9605
XP_005247378                                                           15    9605
>NP_115927
          Length = 1321

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   SPGDMKKS 8
           SPGDMKKS
Sbjct: 840 SPGDMKKS 847
>NP_001273283
          Length = 751

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   SPGDMKKSS 9
           SPG MKK++
Sbjct: 352 SPGQMKKTT 360
>NP_683766
          Length = 926

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   SPGDMKKSS 9
           SPG MKK++
Sbjct: 527 SPGQMKKTT 535
>NP_001273284
          Length = 855

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   SPGDMKKSS 9
           SPG MKK++
Sbjct: 456 SPGQMKKTT 464
>NP_001008895
          Length = 759

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGDMKK 7
           PGD+KK
Sbjct: 729 PGDLKK 734
>NP_001265442
          Length = 659

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGDMKK 7
           PGD+KK
Sbjct: 629 PGDLKK 634
>NP_001265443
          Length = 667

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGDMKK 7
           PGD+KK
Sbjct: 637 PGDLKK 642
>NP_003580
          Length = 659

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGDMKK 7
           PGD+KK
Sbjct: 629 PGDLKK 634
>NP_031399
          Length = 582

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SPGDMKKSS 9
          +PG  KKSS
Sbjct: 78 APGTRKKSS 86
>NP_001157472
          Length = 1042

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 538 SPGEVKK 544
>NP_001098547
          Length = 1116

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 603 SPGEVKK 609
>NP_001157471
          Length = 1043

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 539 SPGEVKK 545
>NP_003671
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   PGDMKKS 8
           PGD+K S
Sbjct: 306 PGDLKNS 312
>NP_001255968
          Length = 536

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SPGDMKKSS 9
          +PG  KKSS
Sbjct: 78 APGTRKKSS 86
>NP_005232
          Length = 1051

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 538 SPGEVKK 544
>NP_112190
          Length = 546

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG+M+K
Sbjct: 491 SPGEMEK 497
>NP_065076
          Length = 1873

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  SPGDMKKSS 9
          S GD+KKS+
Sbjct: 6  SHGDVKKST 14
>NP_001192123
          Length = 1051

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 538 SPGEVKK 544
>NP_004982
          Length = 1239

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 726 SPGEVKK 732
>NP_001098548
          Length = 1051

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 538 SPGEVKK 544
>XP_006723662
          Length = 1920

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  SPGDMKKSS 9
          S GD+KKS+
Sbjct: 6  SHGDVKKST 14
>XP_005260825
          Length = 1923

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  SPGDMKKSS 9
          S GD+KKS+
Sbjct: 6  SHGDVKKST 14
>XP_006723661
          Length = 1970

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  SPGDMKKSS 9
          S GD+KKS+
Sbjct: 6  SHGDVKKST 14
>XP_005248564
          Length = 2342

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SPGDMKKSS 9
            SP DM+ SS
Sbjct: 1564 SPSDMQDSS 1572

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   PGDMKKSS 9
           P D KKSS
Sbjct: 610 PKDAKKSS 617
>XP_006713600
          Length = 841

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 727 SPGEVKK 733
>XP_005247283
          Length = 906

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 402 SPGEVKK 408
>XP_005247282
          Length = 915

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 402 SPGEVKK 408
>XP_005247281
          Length = 916

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 403 SPGEVKK 409
>XP_005247280
          Length = 1051

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 538 SPGEVKK 544
>XP_005247278
          Length = 1052

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 539 SPGEVKK 545
>XP_005247276
          Length = 1052

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 539 SPGEVKK 545
>XP_005247277
          Length = 1052

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 539 SPGEVKK 545
>XP_006713599
          Length = 1116

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 603 SPGEVKK 609
>XP_005247273
          Length = 1212

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 699 SPGEVKK 705
>XP_005247272
          Length = 1230

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 726 SPGEVKK 732
>XP_005247271
          Length = 1231

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 727 SPGEVKK 733
>XP_005247270
          Length = 1240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SPGDMKK 7
           SPG++KK
Sbjct: 727 SPGEVKK 733
>NP_005900
          Length = 2468

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SPGDMKKSS 9
            SP DM+ SS
Sbjct: 1690 SPSDMQDSS 1698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   PGDMKKSS 9
           P D KKSS
Sbjct: 736 PKDAKKSS 743
>NP_000088
          Length = 454

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   PGDMK 6
           PGDMK
Sbjct: 145 PGDMK 149
>NP_115921
          Length = 1894

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    PGDMKKS 8
            P D+KKS
Sbjct: 1645 PNDLKKS 1651
>NP_001623
          Length = 535

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   PGDMK 6
           PGDMK
Sbjct: 293 PGDMK 297
>NP_775921
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  SPGDMKKS 8
          SP D KKS
Sbjct: 29 SPEDFKKS 36
>NP_036553
          Length = 1914

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGDMKKS 8
           S GD+KKS
Sbjct: 830 SNGDIKKS 837
>XP_005267222
          Length = 1819

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    PGDMKKS 8
            P D+KKS
Sbjct: 1570 PNDLKKS 1576
>XP_005247182
          Length = 405

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   PGDMK 6
           PGDMK
Sbjct: 145 PGDMK 149
>XP_005246496
          Length = 550

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   PGDMK 6
           PGDMK
Sbjct: 308 PGDMK 312
>XP_006712061
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  SPGDMKKS 8
          SP D KKS
Sbjct: 29 SPEDFKKS 36
>XP_006712060
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  SPGDMKKS 8
          SP D KKS
Sbjct: 29 SPEDFKKS 36
>XP_006712059
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  SPGDMKKS 8
          SP D KKS
Sbjct: 29 SPEDFKKS 36
>XP_006712058
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  SPGDMKKS 8
          SP D KKS
Sbjct: 29 SPEDFKKS 36
>NP_112603
          Length = 532

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   PGDMK 6
           PGDMK
Sbjct: 290 PGDMK 294
>NP_059990
          Length = 860

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SPGDMKK 7
           SP D+KK
Sbjct: 164 SPDDLKK 170
>NP_001269973
          Length = 2083

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>NP_055062
          Length = 1499

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 492 GDIKKAS 498
>NP_055805
          Length = 2036

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>NP_001269972
          Length = 2049

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>NP_919277
          Length = 2083

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>NP_056295
          Length = 549

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PGDMKKSS 9
           P DM+K S
Sbjct: 446 PSDMQKES 453
>NP_004897
          Length = 396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SPGDMKKSS 9
           SPG+  KSS
Sbjct: 306 SPGNGNKSS 314
>NP_001257460
          Length = 396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SPGDMKKSS 9
           SPG+  KSS
Sbjct: 306 SPGNGNKSS 314
>XP_006723798
          Length = 916

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   PGDMKKS 8
           PGD+K S
Sbjct: 257 PGDLKGS 263
>XP_006720343
          Length = 751

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD++KSS
Sbjct: 18 GDVRKSS 24
>XP_006720167
          Length = 1607

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_006720166
          Length = 2083

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_005267550
          Length = 2084

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_005267549
          Length = 2130

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_005267548
          Length = 2131

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_006720165
          Length = 2542

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_006720164
          Length = 2542

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_006720163
          Length = 2543

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_006720162
          Length = 2589

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_006720161
          Length = 2590

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  GDMKKSS 9
          GD+KKS+
Sbjct: 8  GDVKKST 14
>XP_005266493
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SPGDMKK 7
           SP D+KK
Sbjct: 164 SPDDLKK 170
>XP_005266492
          Length = 623

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SPGDMKK 7
           SP D+KK
Sbjct: 164 SPDDLKK 170
>XP_006714485
          Length = 1585

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 537 GDIKKAS 543
>XP_005263418
          Length = 1654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 647 GDIKKAS 653
>XP_005263417
          Length = 1660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 653 GDIKKAS 659
>XP_006714484
          Length = 1685

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 653 GDIKKAS 659
>XP_005263416
          Length = 1693

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 653 GDIKKAS 659
>XP_006714483
          Length = 1695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 647 GDIKKAS 653
>XP_005263415
          Length = 1701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GDMKKSS 9
           GD+KK+S
Sbjct: 653 GDIKKAS 659
>XP_005247378
          Length = 526

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   PGDMKKSS 9
           P DM+K S
Sbjct: 423 PSDMQKES 430
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.289    0.110    0.287 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 985,015
Number of extensions: 1344
Number of successful extensions: 84
Number of sequences better than 10000.0: 82
Number of HSP's gapped: 84
Number of HSP's successfully gapped: 84
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package