Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 299 NP_005718 17 3301 NP_065853 16 5631 NP_689526 16 5631 NP_699177 16 5631 NP_001273068 16 5631 XP_005271684 16 5631 XP_005271472 16 5631 XP_005271471 16 5631 XP_005271470 16 5631 XP_005271469 16 5631 XP_006718826 16 5631 XP_006718825 16 5631 NP_689800 16 5631 NP_001017969 16 7355 NP_005378 16 7355 NP_001275915 16 7355 NP_001275914 16 7355 NP_009099 16 7355 XP_005256997 16 7355 XP_005256995 16 7355 XP_006718305 16 7355 XP_005253007 16 7355 XP_006716793 16 7355 XP_005251442 16 7355 NP_036421 15 9605 NP_987096 15 9605 NP_003830 15 9605 NP_001265197 15 9605 NP_055641 15 9605 NP_003598 15 9605 NP_005294 15 9605 XP_005260231 15 9605 XP_005260230 15 9605 XP_005266834 15 9605 XP_006711900 15 9605 XP_005273381 15 9605 XP_005273380 15 9605 XP_005273379 15 9605 XP_006711899 15 9605 XP_005273378 15 9605 XP_005273377 15 9605 XP_006711898 15 9605 XP_006711897 15 9605 XP_005273375 15 9605 XP_005273374 15 9605>NP_005350 Length = 552 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNATNTANF 9 SNAT+TANF Sbjct: 206 SNATSTANF 214>NP_005718 Length = 241 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NATNTAN 8 N TNTAN Sbjct: 178 NVTNTAN 184>NP_065853 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATNTAN 8 ATNTAN Sbjct: 360 ATNTAN 365>NP_689526 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNATNTAN 8 SN+TN++N Sbjct: 193 SNSTNSSN 200>NP_699177 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NATNTANF 9 N+T TAN+ Sbjct: 314 NSTETANY 321>NP_001273068 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNATNTAN 8 SN+TN++N Sbjct: 58 SNSTNSSN 65>XP_005271684 Length = 1081 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATNTAN 8 ATNTAN Sbjct: 360 ATNTAN 365>XP_005271472 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NATNTANF 9 N TNT NF Sbjct: 235 NWTNTLNF 242>XP_005271471 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NATNTANF 9 N TNT NF Sbjct: 235 NWTNTLNF 242>XP_005271470 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NATNTANF 9 N TNT NF Sbjct: 204 NWTNTLNF 211>XP_005271469 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NATNTANF 9 N TNT NF Sbjct: 217 NWTNTLNF 224>XP_006718826 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNATNTAN 8 SN+TN++N Sbjct: 193 SNSTNSSN 200>XP_006718825 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNATNTAN 8 SN+TN++N Sbjct: 87 SNSTNSSN 94>NP_689800 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NATNTANF 9 N TNT NF Sbjct: 235 NWTNTLNF 242>NP_001017969 Length = 2103 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTANF 9 TNT+NF Sbjct: 1821 TNTSNF 1826>NP_005378 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTANF 9 TNT+NF Sbjct: 403 TNTSNF 408>NP_001275915 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNATNTANF 9 +NA N+ NF Sbjct: 1261 ANALNSTNF 1269>NP_001275914 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNATNTANF 9 +NA N+ NF Sbjct: 1266 ANALNSTNF 1274>NP_009099 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNATNTANF 9 +NA N+ NF Sbjct: 1226 ANALNSTNF 1234>XP_005256997 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNATNTANF 9 +NA N+ NF Sbjct: 1205 ANALNSTNF 1213>XP_005256995 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNATNTANF 9 +NA N+ NF Sbjct: 1266 ANALNSTNF 1274>XP_006718305 Length = 1743 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTANF 9 TNT+NF Sbjct: 403 TNTSNF 408>XP_005253007 Length = 1817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTANF 9 TNT+NF Sbjct: 403 TNTSNF 408>XP_006716793 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTANF 9 TNT+NF Sbjct: 1035 TNTSNF 1040>XP_005251442 Length = 2073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTANF 9 TNT+NF Sbjct: 1791 TNTSNF 1796>NP_036421 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNATNTANF 9 SNA ANF Sbjct: 182 SNAIGIANF 190>NP_987096 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNATNTANF 9 SNA ANF Sbjct: 182 SNAIGIANF 190>NP_003830 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATNTANF 9 +T+TANF Sbjct: 270 STHTANF 276>NP_001265197 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATNTANF 9 +T+TANF Sbjct: 256 STHTANF 262>NP_055641 Length = 1638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>NP_003598 Length = 1719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>NP_005294 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NATNTANF 9 NA+N A+F Sbjct: 241 NASNVASF 248>XP_005260231 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNATNTANF 9 SNA ANF Sbjct: 182 SNAIGIANF 190>XP_005260230 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNATNTANF 9 SNA ANF Sbjct: 182 SNAIGIANF 190>XP_005266834 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATNTANF 9 +T+TANF Sbjct: 270 STHTANF 276>XP_006711900 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273381 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273380 Length = 1751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273379 Length = 1754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_006711899 Length = 1770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273378 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273377 Length = 1794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_006711898 Length = 1797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_006711897 Length = 1816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273375 Length = 1829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371>XP_005273374 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNATNTANF 9 S+ T+T+NF Sbjct: 363 SSPTDTSNF 371Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.101 0.263 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,429 Number of extensions: 720 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |