Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 22 134 NP_861969 22 134 NP_000259 22 134 NP_861968 22 134 NP_861966 22 134 NP_861970 22 134 NP_861546 22 134 NP_861967 22 134 NP_203127 18 1935 NP_001129131 17 2528 NP_004792 17 2528 NP_004787 17 2528 XP_006720386 17 2528 XP_006720385 17 2528 XP_005268275 17 2528 XP_006712206 17 2528 XP_006712205 17 2528 XP_006712204 17 2528 XP_006712203 17 2528 XP_006712202 17 2528 XP_006712201 17 2528 XP_006712200 17 2528 XP_006712199 17 2528 XP_006712198 17 2528 XP_005264700 17 2528 XP_006712197 17 2528 XP_006712196 17 2528 XP_005264699 17 2528 XP_005273473 17 3301 NP_001127845 17 4312 NP_036361 17 4312 XP_006717787 17 4312 XP_006717786 17 4312 XP_005269703 17 4312 XP_006717785 17 4312 XP_005269700 17 4312 XP_006717784 17 4312 XP_005269699 17 4312 XP_005269702 17 4312 XP_005269701 17 4312 XP_005269697 17 4312 XP_005269698 17 4312 XP_005269696 17 4312 XP_005269695 17 4312 XP_005269694 17 4312 XP_005269693 17 4312 XP_005269692 17 4312 XP_005269691 17 4312 XP_005269690 17 4312 XP_005269689 17 4312 NP_055878 16 5631 XP_005259229 16 5631 NP_115271 16 5631 NP_061749 16 5631 NP_056327 16 7355 NP_004932 16 7355 NP_057332 16 7355 NP_919226 16 7355 NP_008850 16 7355 NP_892121 16 7355 NP_056311 16 7355 NP_002965 16 7355 XP_005257171 16 7355 XP_005257170 16 7355 XP_005266307 16 7355 XP_005266306 16 7355 XP_005266305 16 7355 XP_005266304 16 7355 XP_006713163 16 7355 NP_001191330 15 9605 NP_001158 15 9605 NP_001138912 15 9605 XP_006724817 15 9605>NP_057502 Length = 590 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 504 SLSFDFKDT 512>NP_861969 Length = 507 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 421 SLSFDFKDT 429>NP_000259 Length = 595 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 504 SLSFDFKDT 512>NP_861968 Length = 507 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 421 SLSFDFKDT 429>NP_861966 Length = 548 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 462 SLSFDFKDT 470>NP_861970 Length = 590 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 504 SLSFDFKDT 512>NP_861546 Length = 590 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 504 SLSFDFKDT 512>NP_861967 Length = 549 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMSFDFKDT 9 S+SFDFKDT Sbjct: 463 SLSFDFKDT 471>NP_203127 Length = 236 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MSFDFKD 8 M FDFKD Sbjct: 121 MGFDFKD 127>NP_001129131 Length = 1547 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 543 SISFDFRTT 551>NP_004792 Length = 1477 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 503 SISFDFRTT 511>NP_004787 Length = 1061 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 97 SISFDFRTT 105>XP_006720386 Length = 1571 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 470 SISFDFRTT 478>XP_006720385 Length = 1683 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 478 SISFDFRTT 486>XP_005268275 Length = 1684 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 482 SISFDFRTT 490>XP_006712206 Length = 1222 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 230 SISFDFRTT 238>XP_006712205 Length = 1231 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 230 SISFDFRTT 238>XP_006712204 Length = 1269 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 510 SISFDFRTT 518>XP_006712203 Length = 1416 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 510 SISFDFRTT 518>XP_006712202 Length = 1466 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 495 SISFDFRTT 503>XP_006712201 Length = 1474 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 503 SISFDFRTT 511>XP_006712200 Length = 1481 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 510 SISFDFRTT 518>XP_006712199 Length = 1487 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 495 SISFDFRTT 503>XP_006712198 Length = 1491 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 490 SISFDFRTT 498>XP_005264700 Length = 1496 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 495 SISFDFRTT 503>XP_006712197 Length = 1502 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 510 SISFDFRTT 518>XP_006712196 Length = 1504 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 503 SISFDFRTT 511>XP_005264699 Length = 1511 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMSFDFKDT 9 S+SFDF+ T Sbjct: 510 SISFDFRTT 518>XP_005273473 Length = 169 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MSFDFK 7 MSFDFK Sbjct: 83 MSFDFK 88>NP_001127845 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 511 SVDFKDT 517>NP_036361 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 511 SVDFKDT 517>XP_006717787 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_006717786 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269703 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_006717785 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269700 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_006717784 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269699 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269702 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269701 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269697 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269698 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 320 SVDFKDT 326>XP_005269696 Length = 532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 482 SVDFKDT 488>XP_005269695 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 487 SVDFKDT 493>XP_005269694 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 490 SVDFKDT 496>XP_005269693 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 511 SVDFKDT 517>XP_005269692 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 519 SVDFKDT 525>XP_005269691 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 519 SVDFKDT 525>XP_005269690 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 519 SVDFKDT 525>XP_005269689 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S DFKDT Sbjct: 519 SVDFKDT 525>NP_055878 Length = 921 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFDFKDT 9 S+DFK+T Sbjct: 666 SYDFKNT 672>XP_005259229 Length = 915 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFDFKDT 9 S+DFK+T Sbjct: 660 SYDFKNT 666>NP_115271 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMSFDFKD 8 + SFDF+D Sbjct: 304 NQSFDFED 311>NP_061749 Length = 930 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMSFDFKD 8 + SFDF+D Sbjct: 304 NQSFDFED 311>NP_056327 Length = 4265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SMSFDFK 7 ++SFDFK Sbjct: 4141 TISFDFK 4147>NP_004932 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MSFDFKD 8 +SFDF D Sbjct: 941 LSFDFMD 947>NP_057332 Length = 1901 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SFDF+D Sbjct: 678 SFDFED 683>NP_919226 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MSFDFKDT 9 + FDFK T Sbjct: 460 LCFDFKST 467>NP_008850 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S+D KDT Sbjct: 292 SYDLKDT 298>NP_892121 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SF+FKD Sbjct: 1025 SFEFKD 1030>NP_056311 Length = 1812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SF+FKD Sbjct: 1025 SFEFKD 1030>NP_002965 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 S+D KDT Sbjct: 292 SYDLKDT 298>XP_005257171 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MSFDFKD 8 +SFDF D Sbjct: 941 LSFDFMD 947>XP_005257170 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MSFDFKD 8 +SFDF D Sbjct: 939 LSFDFMD 945>XP_005266307 Length = 1796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SFDF+D Sbjct: 678 SFDFED 683>XP_005266306 Length = 1824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SFDF+D Sbjct: 678 SFDFED 683>XP_005266305 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SFDF+D Sbjct: 633 SFDFED 638>XP_005266304 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFDFKD 8 SFDF+D Sbjct: 678 SFDFED 683>XP_006713163 Length = 4265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SMSFDFK 7 ++SFDFK Sbjct: 4141 TISFDFK 4147>NP_001191330 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 MSFDFKD 8 M F FKD Sbjct: 382 MGFSFKD 388>NP_001158 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 MSFDFKD 8 M F FKD Sbjct: 382 MGFSFKD 388>NP_001138912 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SFDFKDT 9 SFD KDT Sbjct: 648 SFDPKDT 654>XP_006724817 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 MSFDFKD 8 M F FKD Sbjct: 382 MGFSFKD 388Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.129 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 529,109 Number of extensions: 800 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |