Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136098 20 509 NP_000360 20 509 NP_001018046 20 509 XP_005268096 20 509 XP_006720308 20 509 XP_005268094 20 509 XP_005273758 17 3301 XP_006718820 17 3301 NP_005458 17 3301 NP_443171 16 5631 NP_689914 16 5631 NP_079330 16 5631 NP_443125 16 5631 NP_001165889 16 5631 XP_005276254 16 5631 XP_006726434 16 5631 XP_006726433 16 5631 XP_006726432 16 5631 XP_006726431 16 5631 XP_006726411 16 5631 XP_005273759 16 5631 XP_005248898 16 5631 XP_005277553 16 5631 XP_006711781 16 5631 XP_006711780 16 5631 XP_006711779 16 5631 XP_006711778 16 5631 XP_006711209 16 5631 XP_006711208 16 5631 XP_006711165 16 5631 NP_001092742 16 5631 NP_689946 16 5631 NP_848537 16 7355 NP_113659 16 7355 NP_071442 16 7355 XP_006718767 16 7355 XP_006718766 16 7355 NP_004178 15 9605 NP_001269551 15 9605 NP_001140177 15 9605 NP_056163 15 9605 NP_835235 15 9605 NP_775885 15 9605 NP_004644 15 9605 NP_001004060 15 9605 NP_001004067 15 9605 XP_006726609 15 9605 XP_006725258 15 9605 XP_005262620 15 9605 XP_005262619 15 9605 XP_005262618 15 9605 XP_005262617 15 9605 XP_006724672 15 9605 XP_005262092 15 9605 XP_005255375 15 9605 XP_006719787 15 9605 XP_005263969 15 9605 XP_005263968 15 9605 XP_005263967 15 9605 XP_005263966 15 9605 XP_006710027 15 9605 NP_055102 15 9605>NP_001136098 Length = 274 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 S YNLSKVT Sbjct: 96 SFYNLSKVT 104>NP_000360 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 S YNLSKVT Sbjct: 96 SFYNLSKVT 104>NP_001018046 Length = 253 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 S YNLSKVT Sbjct: 96 SFYNLSKVT 104>XP_005268096 Length = 253 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 S YNLSKVT Sbjct: 96 SFYNLSKVT 104>XP_006720308 Length = 274 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 S YNLSKVT Sbjct: 96 SFYNLSKVT 104>XP_005268094 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 S YNLSKVT Sbjct: 96 SFYNLSKVT 104>XP_005273758 Length = 686 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLYNLSK 7 S+YNLSK Sbjct: 546 SIYNLSK 552Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 +YN++K+T Sbjct: 282 VYNINKIT 289>XP_006718820 Length = 707 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLYNLSK 7 S+YNLSK Sbjct: 567 SIYNLSK 573Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 +YN++K+T Sbjct: 303 VYNINKIT 310>NP_005458 Length = 740 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLYNLSK 7 S+YNLSK Sbjct: 600 SIYNLSK 606Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 +YN++K+T Sbjct: 336 VYNINKIT 343>NP_443171 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YNLSKVT 9 YNL K+T Sbjct: 144 YNLEKIT 150>NP_689914 Length = 5058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 LYNLSK Sbjct: 4720 LYNLSK 4725>NP_079330 Length = 1222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LYNLSKVT 9 LYNL+K T Sbjct: 491 LYNLAKST 498>NP_443125 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 SLY+L K+T Sbjct: 150 SLYSLPKLT 158>NP_001165889 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 SLY+L K+T Sbjct: 91 SLYSLPKLT 99>XP_005276254 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006726434 Length = 146 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 48 MHNMSKVT 55>XP_006726433 Length = 164 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006726432 Length = 180 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006726431 Length = 196 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006726411 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_005273759 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 +YN++K+T Sbjct: 336 VYNINKIT 343>XP_005248898 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 SLY+L K+T Sbjct: 150 SLYSLPKLT 158>XP_005277553 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006711781 Length = 146 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 48 MHNMSKVT 55>XP_006711780 Length = 164 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006711779 Length = 180 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006711778 Length = 196 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>XP_006711209 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YNLSKVT 9 YNL K+T Sbjct: 144 YNLEKIT 150>XP_006711208 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YNLSKVT 9 YNL K+T Sbjct: 144 YNLEKIT 150>XP_006711165 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYNLSKVT 9 ++N+SKVT Sbjct: 82 MHNMSKVT 89>NP_001092742 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 SLY+L K+T Sbjct: 150 SLYSLPKLT 158>NP_689946 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLYNLSKVT 9 SLY+L K+T Sbjct: 82 SLYSLPKLT 90>NP_848537 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSKV Sbjct: 161 LYDLSKV 167>NP_113659 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSKV Sbjct: 161 LYDLSKV 167>NP_071442 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLYNLSKVT 9 +LY L K+T Sbjct: 346 TLYELEKIT 354>XP_006718767 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSKV Sbjct: 114 LYDLSKV 120>XP_006718766 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSKV Sbjct: 161 LYDLSKV 167>NP_004178 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>NP_001269551 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>NP_001140177 Length = 1570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>NP_056163 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S +NLSKV Sbjct: 883 SRFNLSKV 890>NP_835235 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLYNLSKVT 9 +++NLSK++ Sbjct: 214 AVFNLSKIS 222>NP_775885 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 +YNLSK Sbjct: 616 IYNLSK 621>NP_004644 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>NP_001004060 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 +YNLSK Sbjct: 616 IYNLSK 621>NP_001004067 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 +YNLSK Sbjct: 616 IYNLSK 621>XP_006726609 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S YNL+K+ Sbjct: 2317 SFYNLTKL 2324>XP_006725258 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 +YNLSK Sbjct: 616 IYNLSK 621>XP_005262620 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>XP_005262619 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>XP_005262618 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>XP_005262617 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>XP_006724672 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>XP_005262092 Length = 1557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYNLSKV 8 LY+LSK+ Sbjct: 112 LYSLSKI 118>XP_005255375 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 +YNLSK Sbjct: 616 IYNLSK 621>XP_006719787 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S YNL+K+ Sbjct: 2317 SFYNLTKL 2324>XP_005263969 Length = 1844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S +NLSKV Sbjct: 844 SRFNLSKV 851>XP_005263968 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S +NLSKV Sbjct: 861 SRFNLSKV 868>XP_005263967 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S +NLSKV Sbjct: 900 SRFNLSKV 907>XP_005263966 Length = 1900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S +NLSKV Sbjct: 900 SRFNLSKV 907>XP_006710027 Length = 2837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLYNLSKV 8 S YNL+K+ Sbjct: 2316 SFYNLTKL 2323>NP_055102 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LYNLSK 7 +YNLSK Sbjct: 616 IYNLSK 621Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.120 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,708 Number of extensions: 588 Number of successful extensions: 65 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |