Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 390 NP_001185763 20 390 NP_055459 20 390 XP_006726410 20 390 XP_006711719 20 390 XP_006711718 20 390 XP_006711717 20 390 XP_006711716 20 390 XP_006711715 20 390 XP_006711714 20 390 XP_006711713 20 390 XP_006711712 20 390 XP_006711711 20 390 XP_006711710 20 390 XP_006711709 20 390 XP_005277503 20 390 XP_005273038 20 390 XP_006711708 20 390 XP_005277500 20 390 XP_006711707 20 390 XP_005277499 20 390 XP_006711706 20 390 XP_006711705 20 390 XP_006711164 20 390 XP_005276153 20 390 XP_003846805 20 390 NP_057218 18 1935 XP_006716561 18 1935 XP_005250812 18 1935 NP_000833 17 3301 NP_001137303 17 3301 XP_006726598 17 3301 XP_006718893 17 3301 XP_006718892 17 3301 XP_006718891 17 3301 NP_001264994 17 4312 NP_001264995 17 4312 NP_001264996 17 4312 NP_001264993 17 4312 NP_060158 17 4312 XP_006719941 17 4312 XP_006719940 17 4312 XP_005252120 17 4312 XP_006717212 17 4312 XP_006715531 17 4312 XP_006715530 17 4312 NP_113619 17 4312 NP_997716 16 5631 NP_001091102 16 5631 XP_006717115 16 5631 NP_001091105 16 5631 NP_001481 16 5631 NP_001091103 16 5631 NP_001091104 16 5631 NP_001165694 16 7355 NP_443731 16 7355 NP_001243064 16 7355 NP_001307 16 7355 NP_001012267 15 9605 NP_060016 15 9605 NP_063941 15 9605 NP_001273898 15 9605 NP_001269122 15 9605 NP_001269121 15 9605 NP_004600 15 9605 NP_892121 15 9605 NP_919412 15 9605 NP_056311 15 9605 NP_001273900 15 9605 NP_002928 15 9605>NP_001185761 Length = 2240 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2100 SLVRSACSF 2108>NP_001185763 Length = 2362 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2206 SLVRSACSF 2214>NP_055459 Length = 2346 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2206 SLVRSACSF 2214>XP_006726410 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 1947 SLVRSACSF 1955>XP_006711719 Length = 2302 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2162 SLVRSACSF 2170>XP_006711718 Length = 1436 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 1213 SLVRSACSF 1221>XP_006711717 Length = 2385 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2162 SLVRSACSF 2170>XP_006711716 Length = 2411 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2271 SLVRSACSF 2279>XP_006711715 Length = 2428 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2205 SLVRSACSF 2213>XP_006711714 Length = 2429 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2206 SLVRSACSF 2214>XP_006711713 Length = 2432 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2209 SLVRSACSF 2217>XP_006711712 Length = 2473 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2250 SLVRSACSF 2258>XP_006711711 Length = 2482 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2259 SLVRSACSF 2267>XP_006711710 Length = 2494 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2271 SLVRSACSF 2279>XP_006711709 Length = 2495 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2272 SLVRSACSF 2280>XP_005277503 Length = 2498 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2369 SLVRSACSF 2377>XP_005273038 Length = 2509 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2369 SLVRSACSF 2377>XP_006711708 Length = 2512 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2289 SLVRSACSF 2297>XP_005277500 Length = 2525 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2369 SLVRSACSF 2377>XP_006711707 Length = 2553 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2330 SLVRSACSF 2338>XP_005277499 Length = 2561 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2369 SLVRSACSF 2377>XP_006711706 Length = 2591 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2368 SLVRSACSF 2376>XP_006711705 Length = 2592 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 2369 SLVRSACSF 2377>XP_006711164 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 1947 SLVRSACSF 1955>XP_005276153 Length = 267 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 163 SLVRSACSF 171>XP_003846805 Length = 306 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SLVRS CSF Sbjct: 202 SLVRSACSF 210>NP_057218 Length = 472 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SL+RSV SF Sbjct: 202 SLIRSVASF 210>XP_006716561 Length = 304 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SL+RSV SF Sbjct: 202 SLIRSVASF 210>XP_005250812 Length = 472 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 SL+RSV SF Sbjct: 202 SLIRSVASF 210>NP_000833 Length = 1180 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 +++RSVCS Sbjct: 505 NIIRSVCS 512>NP_001137303 Length = 1212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 +++RSVCS Sbjct: 505 NIIRSVCS 512>XP_006726598 Length = 885 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVRSVCSF 9 L+R +CSF Sbjct: 668 LIRGLCSF 675>XP_006718893 Length = 1180 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 +++RSVCS Sbjct: 505 NIIRSVCS 512>XP_006718892 Length = 1212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 +++RSVCS Sbjct: 505 NIIRSVCS 512>XP_006718891 Length = 1212 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 +++RSVCS Sbjct: 505 NIIRSVCS 512>NP_001264994 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVRSVCS 8 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_001264995 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVRSVCS 8 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_001264996 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVRSVCS 8 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_001264993 Length = 1194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVRSVCS 8 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_060158 Length = 402 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLVRSVC 7 SLVRS+C Sbjct: 115 SLVRSLC 121>XP_006719941 Length = 699 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 +LVRS C+F Sbjct: 235 ALVRSGCAF 243>XP_006719940 Length = 820 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 +LVRS C+F Sbjct: 364 ALVRSGCAF 372>XP_005252120 Length = 193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLVRSVC 7 SLVRS+C Sbjct: 115 SLVRSLC 121>XP_006717212 Length = 401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLVRSVC 7 SLVRS+C Sbjct: 115 SLVRSLC 121>XP_006715531 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVRSVCS 8 +VRSVCS Sbjct: 519 VVRSVCS 525>XP_006715530 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVRSVCS 8 +VRSVCS Sbjct: 519 VVRSVCS 525>NP_113619 Length = 828 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVRSVCSF 9 +LVRS C+F Sbjct: 364 ALVRSGCAF 372>NP_997716 Length = 227 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLVRSVCS 8 SLV+S CS Sbjct: 26 SLVQSACS 33>NP_001091102 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRSVCSF 9 VRSVC F Sbjct: 377 VRSVCIF 383>XP_006717115 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRSVCSF 9 VRSVC F Sbjct: 377 VRSVCIF 383>NP_001091105 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRSVCSF 9 VRSVC F Sbjct: 377 VRSVCIF 383>NP_001481 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRSVCSF 9 VRSVC F Sbjct: 377 VRSVCIF 383>NP_001091103 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRSVCSF 9 VRSVC F Sbjct: 377 VRSVCIF 383>NP_001091104 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VRSVCSF 9 VRSVC F Sbjct: 377 VRSVCIF 383>NP_001165694 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SLVRSVC 7 SLVR +C Sbjct: 173 SLVRKIC 179>NP_443731 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SLVRSVC 7 SLVR +C Sbjct: 142 SLVRKIC 148>NP_001243064 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVRSVCSF 9 LVR +C F Sbjct: 333 LVRGLCKF 340>NP_001307 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVRSVCSF 9 LVR +C F Sbjct: 389 LVRGLCKF 396>NP_001012267 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 SL++S+C+ Sbjct: 277 SLIKSLCA 284>NP_060016 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVRSVCSF 9 LVR VC F Sbjct: 448 LVRLVCVF 455>NP_063941 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLVRSVCS 8 SLV S+C+ Sbjct: 127 SLVASICN 134>NP_001273898 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 SL++S+C+ Sbjct: 165 SLIKSLCA 172>NP_001269122 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VRSVCS 8 +RS+CS Sbjct: 81 IRSICS 86>NP_001269121 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VRSVCS 8 +RS+CS Sbjct: 81 IRSICS 86>NP_004600 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSVCSF 9 RS+C+F Sbjct: 162 RSICTF 167>NP_892121 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LVRSVCSF 9 L+R++C F Sbjct: 731 LIRALCHF 738>NP_919412 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VRSVCS 8 +RS+CS Sbjct: 81 IRSICS 86>NP_056311 Length = 1812 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LVRSVCSF 9 L+R++C F Sbjct: 731 LIRALCHF 738>NP_001273900 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLVRSVCS 8 SL++S+C+ Sbjct: 104 SLIKSLCA 111>NP_002928 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 VRSVCS 8 +RS+CS Sbjct: 81 IRSICS 86Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,980 Number of extensions: 544 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |