Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001158238 18 1135 NP_008816 18 1135 XP_005256014 18 1135 NP_001008661 17 2528 NP_001008662 17 2528 NP_001367 17 4312 NP_000760 16 5631 NP_000762 16 5631 NP_006112 16 5631 NP_002878 16 5631 XP_006717707 16 5631 XP_005266014 16 5631 NP_076414 16 7355 NP_001002259 16 7355 NP_001274319 16 7355 NP_596870 16 7355 NP_061330 16 7355 NP_001116143 16 7355 NP_004050 16 7355 NP_005119 16 7355 XP_006724131 16 7355 XP_005257066 16 7355 XP_006719211 16 7355 XP_006719207 16 7355 XP_006719206 16 7355 XP_006719205 16 7355 XP_006719204 16 7355 XP_006719203 16 7355 XP_006719202 16 7355 XP_006719201 16 7355 XP_006719200 16 7355 XP_006717374 16 7355 XP_006712406 16 7355 NP_001116144 16 7355 NP_997244 15 9605 NP_000876 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_057125 15 9605 NP_001077422 15 9605 NP_071348 15 9605 NP_060009 15 9605 XP_005256953 15 9605 XP_005256729 15 9605 XP_006721602 15 9605 XP_006721125 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_006712132 15 9605 XP_006712130 15 9605 XP_006712129 15 9605 XP_006712128 15 9605 XP_006712127 15 9605 XP_006712126 15 9605 XP_006712125 15 9605 XP_006712124 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001158238 Length = 2789 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LVNLGESF 9 L+NLGESF Sbjct: 13 LMNLGESF 20>NP_008816 Length = 3703 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LVNLGESF 9 L+NLGESF Sbjct: 927 LMNLGESF 934>XP_005256014 Length = 3702 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LVNLGESF 9 L+NLGESF Sbjct: 927 LMNLGESF 934>NP_001008661 Length = 454 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 S+VNLG+ F Sbjct: 64 SVVNLGQGF 72>NP_001008662 Length = 420 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 S+VNLG+ F Sbjct: 30 SVVNLGQGF 38>NP_001367 Length = 4646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLGESF 9 NLGESF Sbjct: 4012 NLGESF 4017>NP_000760 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 +L++LGE F Sbjct: 86 ALIDLGEEF 94>NP_000762 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 +L++LGE F Sbjct: 86 ALIDLGEEF 94>NP_006112 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLVNLGES 8 SLVNLG S Sbjct: 66 SLVNLGGS 73>NP_002878 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLVNLGESF 9 SL+ GESF Sbjct: 329 SLIERGESF 337>XP_006717707 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 +L++LGE F Sbjct: 86 ALIDLGEEF 94>XP_005266014 Length = 454 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLVNLGESF 9 SL+ GESF Sbjct: 123 SLIERGESF 131>NP_076414 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 973 LNNLGETF 980>NP_001002259 Length = 1127 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 1023 LNNLGETF 1030>NP_001274319 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VNLG+ F Sbjct: 124 VVNLGQGF 131>NP_596870 Length = 5604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VNLGESF 9 +N+GESF Sbjct: 3687 LNVGESF 3693>NP_061330 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLVNLGESF 9 +L+NLG+++ Sbjct: 29 NLINLGKNY 37>NP_001116143 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VNLG+ F Sbjct: 30 VVNLGQGF 37>NP_004050 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VNLG+ F Sbjct: 30 VVNLGQGF 37>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLVNLGE 7 SL+NLG+ Sbjct: 1422 SLINLGQ 1428>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLVNLGE 7 SL+NLG+ Sbjct: 1422 SLINLGQ 1428>XP_005257066 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 S+ +LGESF Sbjct: 465 SVQHLGESF 473>XP_006719211 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 690 LNNLGETF 697>XP_006719207 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 939 LNNLGETF 946>XP_006719206 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 942 LNNLGETF 949>XP_006719205 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 953 LNNLGETF 960>XP_006719204 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 974 LNNLGETF 981>XP_006719203 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 987 LNNLGETF 994>XP_006719202 Length = 1092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 988 LNNLGETF 995>XP_006719201 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 1002 LNNLGETF 1009>XP_006719200 Length = 1126 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 L NLGE+F Sbjct: 1022 LNNLGETF 1029>XP_006717374 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VNLG+ F Sbjct: 64 VVNLGQGF 71>XP_006712406 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NLGESF 9 N+GESF Sbjct: 779 NMGESF 784>NP_001116144 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VNLG+ F Sbjct: 30 VVNLGQGF 37>NP_997244 Length = 3169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NLGESF 9 NLG+SF Sbjct: 2905 NLGDSF 2910>NP_000876 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLVNLGE 7 S+VNLG+ Sbjct: 371 SIVNLGD 377>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 17139 VVNAGETF 17146>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 17264 VVNAGETF 17271>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 24563 VVNAGETF 24570>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 23636 VVNAGETF 23643>NP_057125 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 SLV LG++F Sbjct: 116 SLVFLGQAF 124>NP_001077422 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1584 LCNMGEKF 1591>NP_071348 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1584 LCNMGEKF 1591>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLVNLGES 8 SL+NLG + Sbjct: 3893 SLINLGRA 3900>XP_005256953 Length = 1178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NLGESF 9 NLGES+ Sbjct: 1162 NLGESY 1167>XP_005256729 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 SLV LG++F Sbjct: 115 SLVFLGQAF 123>XP_006721602 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLVNLGESF 9 SLV LG++F Sbjct: 121 SLVFLGQAF 129>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLVNLGES 8 SL+NLG + Sbjct: 3847 SLINLGRA 3854>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 12876 VVNAGETF 12883>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 14235 VVNAGETF 14242>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 24191 VVNAGETF 24198>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 25697 VVNAGETF 25704>XP_006712132 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 767 LCNMGEKF 774>XP_006712130 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1462 LCNMGEKF 1469>XP_006712129 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1463 LCNMGEKF 1470>XP_006712128 Length = 1879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1510 LCNMGEKF 1517>XP_006712127 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1584 LCNMGEKF 1591>XP_006712126 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1544 LCNMGEKF 1551>XP_006712125 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1583 LCNMGEKF 1590>XP_006712124 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LVNLGESF 9 L N+GE F Sbjct: 1584 LCNMGEKF 1591>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 26204 VVNAGETF 26211>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVNLGESF 9 +VN GE+F Sbjct: 17331 VVNAGETF 17338Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.135 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 552,234 Number of extensions: 1181 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |