Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_002589                                                              17    4312
NP_001186390                                                           17    4312
NP_659005                                                              17    4312
NP_954674                                                              17    4312
NP_001135743                                                           17    4312
NP_001276692                                                           17    4312
XP_006715561                                                           17    4312
NP_001135742                                                           17    4312
NP_055828                                                              16    5631
NP_001009999                                                           16    5631
NP_569056                                                              16    5631
NP_001193810                                                           16    5631
NP_001093633                                                           16    5631
NP_001093637                                                           16    5631
NP_001092049                                                           16    5631
XP_006710537                                                           16    5631
XP_006710536                                                           16    5631
XP_006710535                                                           16    5631
XP_005245843                                                           16    5631
NP_060836                                                              16    5631
NP_001265526                                                           16    7355
NP_001265525                                                           16    7355
NP_002758                                                              16    7355
NP_001230865                                                           16    7355
NP_001107018                                                           16    7355
NP_001230871                                                           16    7355
NP_055417                                                              16    7355
NP_001107019                                                           16    7355
NP_002757                                                              16    7355
NP_001230869                                                           16    7355
NP_001230704                                                           16    7355
NP_057441                                                              16    7355
NP_001230870                                                           16    7355
XP_005256786                                                           16    7355
XP_005256784                                                           16    7355
XP_005256783                                                           16    7355
XP_005256782                                                           16    7355
XP_005256781                                                           16    7355
XP_006719051                                                           16    7355
NP_689896                                                              15    9605
NP_001077072                                                           15    9605
NP_001077071                                                           15    9605
NP_000255                                                              15    9605
NP_001158116                                                           15    9605
NP_001158117                                                           15    9605
NP_001158119                                                           15    9605
NP_001087239                                                           15    9605
NP_001158118                                                           15    9605
NP_005402                                                              15    9605
NP_001269676                                                           15    9605
NP_001269674                                                           15    9605
NP_542987                                                              15    9605
NP_775104                                                              15    9605
NP_001092138                                                           15    9605
NP_001180299                                                           15    9605
NP_149072                                                              15    9605
NP_056011                                                              15    9605
NP_001124479                                                           15    9605
NP_057381                                                              15    9605
NP_001180298                                                           15    9605
NP_036205                                                              15    9605
XP_006723747                                                           15    9605
XP_005270189                                                           15    9605
XP_005270188                                                           15    9605
XP_005270186                                                           15    9605
XP_005270185                                                           15    9605
XP_005270119                                                           15    9605
XP_006718017                                                           15    9605
XP_006718016                                                           15    9605
XP_005270118                                                           15    9605
XP_005252438                                                           15    9605
XP_005252437                                                           15    9605
XP_005262928                                                           15    9605
XP_005262927                                                           15    9605
XP_005262926                                                           15    9605
XP_005262875                                                           15    9605
XP_005262874                                                           15    9605
XP_006714198                                                           15    9605
XP_005262873                                                           15    9605
XP_005262872                                                           15    9605
XP_005262871                                                           15    9605
XP_005262870                                                           15    9605
XP_005262869                                                           15    9605
XP_005262868                                                           15    9605
XP_005262867                                                           15    9605
>NP_002589
          Length = 344

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  SKVGGRIA 8
          SKVGGR A
Sbjct: 29 SKVGGRPA 36
>NP_001186390
          Length = 221

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  SKVGGRIA 8
          SKVGGR A
Sbjct: 29 SKVGGRPA 36
>NP_659005
          Length = 228

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  SKVGGRIA 8
          SKVGGR A
Sbjct: 29 SKVGGRPA 36
>NP_954674
          Length = 319

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           S VGGR+A
Sbjct: 163 SSVGGRLA 170
>NP_001135743
          Length = 319

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           S VGGR+A
Sbjct: 163 SSVGGRLA 170
>NP_001276692
          Length = 379

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           S VGGR+A
Sbjct: 223 SSVGGRLA 230
>XP_006715561
          Length = 298

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  SKVGGRIA 8
          SKVGGR A
Sbjct: 29 SKVGGRPA 36
>NP_001135742
          Length = 319

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           S VGGR+A
Sbjct: 163 SSVGGRLA 170
>NP_055828
          Length = 852

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KVGGRIA 8
           +VGGR+A
Sbjct: 312 RVGGRVA 318
>NP_001009999
          Length = 876

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KVGGRIA 8
           +VGGR+A
Sbjct: 332 RVGGRVA 338
>NP_569056
          Length = 912

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K GG++AK
Sbjct: 425 KAGGKLAK 432
>NP_001193810
          Length = 597

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K GG++AK
Sbjct: 110 KAGGKLAK 117
>NP_001093633
          Length = 821

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K GG++AK
Sbjct: 334 KAGGKLAK 341
>NP_001093637
          Length = 597

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K GG++AK
Sbjct: 110 KAGGKLAK 117
>NP_001092049
          Length = 904

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K GG++AK
Sbjct: 417 KAGGKLAK 424
>XP_006710537
          Length = 878

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KVGGRIA 8
           +VGGR+A
Sbjct: 332 RVGGRVA 338
>XP_006710536
          Length = 828

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KVGGRIA 8
           +VGGR+A
Sbjct: 332 RVGGRVA 338
>XP_006710535
          Length = 858

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KVGGRIA 8
           +VGGR+A
Sbjct: 312 RVGGRVA 318
>XP_005245843
          Length = 872

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KVGGRIA 8
           +VGGR+A
Sbjct: 332 RVGGRVA 338
>NP_060836
          Length = 217

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VGGRIAK 9
           VGGR+A+
Sbjct: 145 VGGRVAR 151
>NP_001265526
          Length = 999

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KVGGRIAK 9
           K GG IAK
Sbjct: 213 KAGGSIAK 220
>NP_001265525
          Length = 1003

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KVGGRIAK 9
           K GG IAK
Sbjct: 217 KAGGSIAK 224
>NP_002758
          Length = 369

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 260 VGGRIA 265
>NP_001230865
          Length = 329

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 220 VGGRIA 225
>NP_001107018
          Length = 760

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VGGRIAK 9
           VGGR+A+
Sbjct: 627 VGGRVAE 633
>NP_001230871
          Length = 283

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 174 VGGRIA 179
>NP_055417
          Length = 1358

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    SKVGGRI 7
            S++GGR+
Sbjct: 1039 SRIGGRV 1045
>NP_001107019
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VGGRIAK 9
           VGGR+A+
Sbjct: 467 VGGRVAE 473
>NP_002757
          Length = 385

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 276 VGGRIA 281
>NP_001230869
          Length = 320

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 260 VGGRIA 265
>NP_001230704
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VGGRIAK 9
           VGGR+A+
Sbjct: 324 VGGRVAE 330
>NP_057441
          Length = 759

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VGGRIAK 9
           VGGR+A+
Sbjct: 626 VGGRVAE 632
>NP_001230870
          Length = 283

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 174 VGGRIA 179
>XP_005256786
          Length = 283

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 174 VGGRIA 179
>XP_005256784
          Length = 283

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 174 VGGRIA 179
>XP_005256783
          Length = 369

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 260 VGGRIA 265
>XP_005256782
          Length = 369

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 260 VGGRIA 265
>XP_005256781
          Length = 369

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VGGRIA 8
           VGGRIA
Sbjct: 260 VGGRIA 265
>XP_006719051
          Length = 998

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KVGGRIAK 9
           K GG IAK
Sbjct: 216 KAGGSIAK 223
>NP_689896
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 296 SKIGKRVA 303
>NP_001077072
          Length = 1446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   KVGGRIAK 9
           +VGGR+++
Sbjct: 130 EVGGRVSR 137
>NP_001077071
          Length = 1381

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  KVGGRIAK 9
          +VGGR+++
Sbjct: 65 EVGGRVSR 72
>NP_000255
          Length = 1447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   KVGGRIAK 9
           +VGGR+++
Sbjct: 131 EVGGRVSR 138
>NP_001158116
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>NP_001158117
          Length = 214

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 122 ARAGGRIA 129
>NP_001158119
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>NP_001087239
          Length = 263

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 171 ARAGGRIA 178
>NP_001158118
          Length = 199

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 107 ARAGGRIA 114
>NP_005402
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>NP_001269676
          Length = 609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K+GG+I K
Sbjct: 491 KMGGKIPK 498
>NP_001269674
          Length = 865

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K+GG+I K
Sbjct: 747 KMGGKIPK 754
>NP_542987
          Length = 1189

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    VGGRIA 8
            +GGRIA
Sbjct: 1093 IGGRIA 1098
>NP_775104
          Length = 872

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K+GG+I K
Sbjct: 754 KMGGKIPK 761
>NP_001092138
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>NP_001180299
          Length = 1189

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    VGGRIA 8
            +GGRIA
Sbjct: 1093 IGGRIA 1098
>NP_149072
          Length = 2240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    VGGRIA 8
            +GGRIA
Sbjct: 1093 IGGRIA 1098
>NP_056011
          Length = 1609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVGGRI 7
           KVGGR+
Sbjct: 728 KVGGRL 733
>NP_001124479
          Length = 1610

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVGGRI 7
           KVGGR+
Sbjct: 729 KVGGRL 734
>NP_057381
          Length = 505

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  KVGGRIA 8
          +VGGR+A
Sbjct: 70 EVGGRLA 76
>NP_001180298
          Length = 2240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    VGGRIA 8
            +GGRIA
Sbjct: 1093 IGGRIA 1098
>NP_036205
          Length = 541

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVGGRI 7
           KVGGR+
Sbjct: 214 KVGGRL 219
>XP_006723747
          Length = 1240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    VGGRIA 8
            +GGRIA
Sbjct: 1093 IGGRIA 1098
>XP_005270189
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>XP_005270188
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>XP_005270186
          Length = 263

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 171 ARAGGRIA 178
>XP_005270185
          Length = 265

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 173 ARAGGRIA 180
>XP_005270119
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 156 ARAGGRIA 163
>XP_006718017
          Length = 258

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 166 ARAGGRIA 173
>XP_006718016
          Length = 263

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 171 ARAGGRIA 178
>XP_005270118
          Length = 278

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           ++ GGRIA
Sbjct: 186 ARAGGRIA 193
>XP_005252438
          Length = 784

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K+GG+I K
Sbjct: 666 KMGGKIPK 673
>XP_005252437
          Length = 807

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KVGGRIAK 9
           K+GG+I K
Sbjct: 689 KMGGKIPK 696
>XP_005262928
          Length = 965

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  KVGGRI 7
          KVGGR+
Sbjct: 84 KVGGRL 89
>XP_005262927
          Length = 1526

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVGGRI 7
           KVGGR+
Sbjct: 645 KVGGRL 650
>XP_005262926
          Length = 1609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVGGRI 7
           KVGGR+
Sbjct: 729 KVGGRL 734
>XP_005262875
          Length = 328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  SKVGGRIA 8
          SK+G R+A
Sbjct: 64 SKIGKRVA 71
>XP_005262874
          Length = 328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  SKVGGRIA 8
          SK+G R+A
Sbjct: 64 SKIGKRVA 71
>XP_006714198
          Length = 339

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 296 SKIGKRVA 303
>XP_005262873
          Length = 385

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 121 SKIGKRVA 128
>XP_005262872
          Length = 385

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 121 SKIGKRVA 128
>XP_005262871
          Length = 385

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 121 SKIGKRVA 128
>XP_005262870
          Length = 431

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 167 SKIGKRVA 174
>XP_005262869
          Length = 502

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 296 SKIGKRVA 303
>XP_005262868
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 296 SKIGKRVA 303
>XP_005262867
          Length = 560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SKVGGRIA 8
           SK+G R+A
Sbjct: 296 SKIGKRVA 303
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.312    0.134    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 485,717
Number of extensions: 594
Number of successful extensions: 85
Number of sequences better than 10000.0: 85
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 85
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package