Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1135 XP_005262424 18 1135 NP_001274433 16 5631 NP_065859 16 5631 NP_490595 16 5631 XP_005263889 16 5631 XP_006712890 16 5631 XP_005263888 16 5631 XP_005263887 16 5631 XP_005246870 16 5631 XP_005246869 16 5631 XP_006711862 16 5631 XP_005273271 16 5631 XP_005273270 16 5631 XP_005273269 16 5631 XP_005273268 16 5631 XP_005273266 16 5631 XP_006711861 16 5631 NP_001123917 16 5631 NP_001274432 16 5631 NP_006742 16 5631 NP_005621 16 7355 NP_001139784 16 7355 NP_705832 16 7355 XP_005256921 16 7355 NP_006720 15 9605 NP_065816 15 9605 NP_001019554 15 9605 NP_705618 15 9605 NP_055718 15 9605 NP_004289 15 9605 NP_001265241 15 9605 XP_006719740 15 9605 XP_006719739 15 9605 XP_006719738 15 9605 XP_005269272 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605 NP_002168 15 9605>NP_722576 Length = 3080 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKSSGAISS 9 SKS+GAISS Sbjct: 1682 SKSTGAISS 1690>XP_005262424 Length = 2875 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKSSGAISS 9 SKS+GAISS Sbjct: 1477 SKSTGAISS 1485>NP_001274433 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSSGAISS 9 KSSG +SS Sbjct: 8 KSSGTVSS 15>NP_065859 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>NP_490595 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG+ SS Sbjct: 638 SKSSGSSSS 646>XP_005263889 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG+ SS Sbjct: 463 SKSSGSSSS 471>XP_006712890 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG+ SS Sbjct: 494 SKSSGSSSS 502>XP_005263888 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG+ SS Sbjct: 494 SKSSGSSSS 502>XP_005263887 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG+ SS Sbjct: 617 SKSSGSSSS 625>XP_005246870 Length = 1252 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSSGAISS 9 KSSG +SS Sbjct: 161 KSSGTVSS 168>XP_005246869 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSSGAISS 9 KSSG +SS Sbjct: 161 KSSGTVSS 168>XP_006711862 Length = 1704 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>XP_005273271 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>XP_005273270 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>XP_005273269 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>XP_005273268 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>XP_005273266 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>XP_006711861 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKSSG++ S Sbjct: 1357 SKSSGSLDS 1365>NP_001123917 Length = 1259 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSSGAISS 9 KSSG +SS Sbjct: 161 KSSGTVSS 168>NP_001274432 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSSGAISS 9 KSSG +SS Sbjct: 161 KSSGTVSS 168>NP_006742 Length = 1256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSSGAISS 9 KSSG +SS Sbjct: 161 KSSGTVSS 168>NP_005621 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSGAISS 9 S SSG ISS Sbjct: 67 SSSSGLISS 75>NP_001139784 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SKSSGAIS 8 SKSS AIS Sbjct: 756 SKSSSAIS 763>NP_705832 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SKSSGAIS 8 SKSS AIS Sbjct: 708 SKSSSAIS 715>XP_005256921 Length = 907 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SKSSGAIS 8 SKSS AIS Sbjct: 677 SKSSSAIS 684>NP_006720 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S+ +GAISS Sbjct: 1092 SRHNGAISS 1100>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2934 SSSTGAIST 2942>NP_001019554 Length = 2385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKS+GA +S Sbjct: 1168 SKSAGATTS 1176>NP_705618 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 +KSS AISS Sbjct: 1125 AKSSTAISS 1133>NP_055718 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKS+GA +S Sbjct: 1168 SKSAGATTS 1176>NP_004289 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 +KSS AISS Sbjct: 1066 AKSSTAISS 1074>NP_001265241 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 +KSS AISS Sbjct: 1061 AKSSTAISS 1069>XP_006719740 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKS+GA +S Sbjct: 668 SKSAGATTS 676>XP_006719739 Length = 2306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKS+GA +S Sbjct: 1111 SKSAGATTS 1119>XP_006719738 Length = 2340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKS+GA +S Sbjct: 1145 SKSAGATTS 1153>XP_005269272 Length = 2356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 SKS+GA +S Sbjct: 1168 SKSAGATTS 1176>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2928 SSSTGAIST 2936>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2939 SSSTGAIST 2947>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2945 SSSTGAIST 2953>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2946 SSSTGAIST 2954>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2963 SSSTGAIST 2971>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2972 SSSTGAIST 2980>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2973 SSSTGAIST 2981>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2973 SSSTGAIST 2981>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKSSGAISS 9 S S+GAIS+ Sbjct: 2974 SSSTGAIST 2982>NP_002168 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KSSGAISS 9 +S+GAISS Sbjct: 131 ESAGAISS 138Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.272 0.0901 0.188 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 350,864 Number of extensions: 521 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |