Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_037440 19 869 XP_005247460 19 869 XP_005247459 19 869 NP_001074924 17 2528 XP_006713895 17 2528 XP_005247980 17 2528 XP_005247979 17 2528 XP_005247978 17 2528 NP_055694 17 2528 NP_004358 17 3301 NP_113597 17 3301 NP_001245340 17 3301 NP_001245342 17 3301 NP_443176 17 3301 NP_001245341 17 3301 NP_001245343 17 3301 XP_005255139 17 3301 XP_006721078 17 3301 XP_005255138 17 3301 XP_006721077 17 3301 XP_005255137 17 3301 NP_775760 17 4312 XP_006714502 17 4312 NP_001010893 16 5631 NP_001077430 16 7355 NP_775907 16 7355 NP_001257906 16 7355 NP_001257904 16 7355 NP_001257905 16 7355 NP_055576 16 7355 NP_665682 16 7355 NP_001154806 16 7355 NP_001188410 16 7355 NP_115912 16 7355 NP_001188411 16 7355 NP_001188409 16 7355 NP_056542 16 7355 NP_056280 16 7355 NP_005758 16 7355 NP_001155969 16 7355 NP_001049 16 7355 NP_001239085 16 7355 XP_005258866 16 7355 XP_006716126 16 7355 XP_005250566 16 7355 XP_005250565 16 7355 XP_006712295 16 7355 XP_006712294 16 7355 NP_001120832 16 7355 NP_001120831 16 7355 NP_001120829 16 7355 NP_001120830 16 7355 NP_065165 16 7355 NP_001155970 16 7355 NP_006436 15 9605 NP_003741 15 9605 NP_006662 15 9605 NP_001274524 15 9605 NP_001274526 15 9605 NP_003560 15 9605 NP_945314 15 9605>NP_037440 Length = 319 Score = 18.9 bits (37), Expect = 869 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIVSTVIW 9 +K++STV+W Sbjct: 131 AKMISTVVW 139>XP_005247460 Length = 319 Score = 18.9 bits (37), Expect = 869 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIVSTVIW 9 +K++STV+W Sbjct: 131 AKMISTVVW 139>XP_005247459 Length = 319 Score = 18.9 bits (37), Expect = 869 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIVSTVIW 9 +K++STV+W Sbjct: 131 AKMISTVVW 139>NP_001074924 Length = 338 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 SK++S ++W Sbjct: 138 SKLLSVIVW 146>XP_006713895 Length = 338 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 SK++S ++W Sbjct: 138 SKLLSVIVW 146>XP_005247980 Length = 338 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 SK++S ++W Sbjct: 138 SKLLSVIVW 146>XP_005247979 Length = 338 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 SK++S ++W Sbjct: 138 SKLLSVIVW 146>XP_005247978 Length = 338 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 SK++S ++W Sbjct: 138 SKLLSVIVW 146>NP_055694 Length = 338 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 SK++S ++W Sbjct: 138 SKLLSVIVW 146>NP_004358 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SKI+ V+W Sbjct: 164 SKIICLVVW 172>NP_113597 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SKI+ V+W Sbjct: 164 SKIICLVVW 172>NP_001245340 Length = 640 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 580 SKVVKAILW 588>NP_001245342 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 551 SKVVKAILW 559>NP_443176 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 615 SKVVKAILW 623>NP_001245341 Length = 605 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 545 SKVVKAILW 553>NP_001245343 Length = 519 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 459 SKVVKAILW 467>XP_005255139 Length = 514 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 454 SKVVKAILW 462>XP_006721078 Length = 576 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 516 SKVVKAILW 524>XP_005255138 Length = 583 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 523 SKVVKAILW 531>XP_006721077 Length = 655 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 595 SKVVKAILW 603>XP_005255137 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+V ++W Sbjct: 615 SKVVKAILW 623>NP_775760 Length = 1585 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KIVSTVIW 9 K +STV+W Sbjct: 563 KNISTVLW 570>XP_006714502 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KIVSTVIW 9 K +STV+W Sbjct: 46 KNISTVLW 53>NP_001010893 Length = 438 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SKIVSTVIW 9 SKIVST+++ Sbjct: 272 SKIVSTLLF 280>NP_001077430 Length = 1523 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 +++VST +W Sbjct: 1453 TELVSTFLW 1461>NP_775907 Length = 1518 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 +++VST +W Sbjct: 1448 TELVSTFLW 1456>NP_001257906 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSTVIW 9 VST+IW Sbjct: 100 VSTLIW 105>NP_001257904 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSTVIW 9 VST+IW Sbjct: 100 VSTLIW 105>NP_001257905 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSTVIW 9 VST+IW Sbjct: 113 VSTLIW 118>NP_055576 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSTVIW 9 VST+IW Sbjct: 100 VSTLIW 105>NP_665682 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 930 SKVDSPVLW 938>NP_001154806 Length = 134 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK++ ++W Sbjct: 125 SKLIGPILW 133>NP_001188410 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 895 SKVDSPVLW 903>NP_115912 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 926 SKVDSPVLW 934>NP_001188411 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 890 SKVDSPVLW 898>NP_001188409 Length = 959 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 951 SKVDSPVLW 959>NP_056542 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 +K+V VIW Sbjct: 147 TKVVICVIW 155>NP_056280 Length = 1508 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KIVSTVIW 9 K+V+T+ W Sbjct: 579 KLVNTISW 586>NP_005758 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 +KIV T +W Sbjct: 133 AKIVCTGVW 141>NP_001155969 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 +KIV T +W Sbjct: 133 AKIVCTGVW 141>NP_001049 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 +K+V VIW Sbjct: 147 TKVVICVIW 155>NP_001239085 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KIVSTVIW 9 K+V+T+ W Sbjct: 578 KLVNTISW 585>XP_005258866 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIVSTVIW 9 +++VST +W Sbjct: 1416 TELVSTFLW 1424>XP_006716126 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>XP_005250566 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>XP_005250565 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>XP_006712295 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 915 SKVDSPVLW 923>XP_006712294 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 SK+ S V+W Sbjct: 920 SKVDSPVLW 928>NP_001120832 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>NP_001120831 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>NP_001120829 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>NP_001120830 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>NP_065165 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 6/9 (66%) Query: 1 SKIVSTVIW 9 SK+ ++W Sbjct: 3 SKVTDAIVW 11>NP_001155970 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKIVSTVIW 9 +KIV T +W Sbjct: 133 AKIVCTGVW 141>NP_006436 Length = 2335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 KIVSTVIW 9 KI+ T +W Sbjct: 1820 KIIHTSVW 1827>NP_003741 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 VSTVIW 9 VSTV W Sbjct: 279 VSTVFW 284>NP_006662 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 KIVSTVIW 9 KIV+ +W Sbjct: 259 KIVAVAVW 266>NP_001274524 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 KIVSTVIW 9 KIV+ +W Sbjct: 259 KIVAVAVW 266>NP_001274526 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 KIVSTVIW 9 KIV+ +W Sbjct: 187 KIVAVAVW 194>NP_003560 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 IVSTVIW 9 I+S +IW Sbjct: 251 IISLIIW 257>NP_945314 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKIVSTVI 8 S+I+ST++ Sbjct: 1373 SRIISTIV 1380Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.126 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 356,160 Number of extensions: 524 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |