Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 17 3301 XP_005262424 17 3301 NP_001020437 17 3301 NP_114172 16 7355 NP_005679 16 7355 XP_005247116 16 7355 XP_005247115 16 7355 NP_001191217 15 9605 NP_001191216 15 9605 NP_001018016 15 9605 NP_001191222 15 9605 NP_001191214 15 9605 NP_001018017 15 9605 NP_001191215 15 9605 NP_002447 15 9605 NP_001185624 15 9605 NP_002395 15 9605 NP_001180462 15 9605 NP_003148 15 9605 NP_055855 15 9605 NP_037363 15 9605 NP_620074 15 9605 NP_001269070 15 9605 NP_001124332 15 9605 NP_002709 15 9605 NP_001119580 15 9605 NP_000330 15 9605 NP_001119579 15 9605 NP_055614 15 9605 NP_036553 15 9605 NP_003807 15 9605 XP_006724785 15 9605 XP_006724784 15 9605 XP_006724783 15 9605 XP_006724782 15 9605 XP_005256176 15 9605 XP_006720158 15 9605 XP_005267547 15 9605 XP_005267546 15 9605 XP_005248810 15 9605 XP_006715597 15 9605 XP_005248809 15 9605 XP_006713749 15 9605 XP_006713373 15 9605 NP_001695 15 9605>NP_722576 Length = 3080 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DMFIQN 9 DMFIQN Sbjct: 2657 DMFIQN 2662>XP_005262424 Length = 2875 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DMFIQN 9 DMFIQN Sbjct: 2452 DMFIQN 2457>NP_001020437 Length = 250 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISDMFIQN 9 ISD+FI N Sbjct: 126 ISDLFIDN 133>NP_114172 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SISDMFIQN 9 SI D F+QN Sbjct: 228 SIIDRFMQN 236>NP_005679 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 ++MFIQN Sbjct: 990 AEMFIQN 996>XP_005247116 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 ++MFIQN Sbjct: 990 AEMFIQN 996>XP_005247115 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 ++MFIQN Sbjct: 990 AEMFIQN 996>NP_001191217 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 82 ISEMFLQ 88>NP_001191216 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 100 ISEMFLQ 106>NP_001018016 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 82 ISEMFLQ 88>NP_001191222 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 91 ISEMFLQ 97>NP_001191214 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 293 ISEMFLQ 299>NP_001018017 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 73 ISEMFLQ 79>NP_001191215 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 302 ISEMFLQ 308>NP_002447 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISDMFIQ 8 IS+MF+Q Sbjct: 91 ISEMFLQ 97>NP_001185624 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 DMFIQN 9 D+F+QN Sbjct: 217 DLFVQN 222>NP_002395 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 DMFIQN 9 D+F+QN Sbjct: 193 DLFVQN 198>NP_001180462 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SISDMFIQ 8 S+SD F+Q Sbjct: 288 SVSDGFVQ 295>NP_003148 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SISDMFIQ 8 S+SD F+Q Sbjct: 377 SVSDGFVQ 384>NP_055855 Length = 2098 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SISDMFIQ 8 SISD FI+ Sbjct: 558 SISDAFIK 565>NP_037363 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ISDMFIQN 9 ISDM QN Sbjct: 195 ISDMAFQN 202>NP_620074 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 465 SISDKFFQ 472>NP_001269070 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 414 SISDKFFQ 421>NP_001124332 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 414 SISDKFFQ 421>NP_002709 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SISDMFIQN 9 +++ MF+QN Sbjct: 196 NLTSMFLQN 204>NP_001119580 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 +D+F+QN Sbjct: 322 ADIFVQN 328>NP_000330 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 +D+F+QN Sbjct: 322 ADIFVQN 328>NP_001119579 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 +D+F+QN Sbjct: 321 ADIFVQN 327>NP_055614 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 144 SISDKFFQ 151>NP_036553 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SISDMFIQN 9 SISD+ QN Sbjct: 1101 SISDLNFQN 1109>NP_003807 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DMFIQN 9 D+FIQN Sbjct: 496 DVFIQN 501>XP_006724785 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 414 SISDKFFQ 421>XP_006724784 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 414 SISDKFFQ 421>XP_006724783 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 414 SISDKFFQ 421>XP_006724782 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SISDMFIQ 8 SISD F Q Sbjct: 414 SISDKFFQ 421>XP_005256176 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SDMFIQN 9 +D+F+QN Sbjct: 321 ADIFVQN 327>XP_006720158 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ISDMFIQN 9 ISDM QN Sbjct: 195 ISDMAFQN 202>XP_005267547 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ISDMFIQN 9 ISDM QN Sbjct: 195 ISDMAFQN 202>XP_005267546 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ISDMFIQN 9 ISDM QN Sbjct: 195 ISDMAFQN 202>XP_005248810 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SISDMFIQN 9 S+S+MF +N Sbjct: 43 SVSEMFPKN 51>XP_006715597 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SISDMFIQN 9 S+S+MF +N Sbjct: 43 SVSEMFPKN 51>XP_005248809 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SISDMFIQN 9 S+S+MF +N Sbjct: 43 SVSEMFPKN 51>XP_006713749 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SISDMFIQN 9 +++ MF+QN Sbjct: 196 NLTSMFLQN 204>XP_006713373 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SISDMFIQ 8 S+SD F+Q Sbjct: 377 SVSDGFVQ 384>NP_001695 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SISDMFIQN 9 S+S+MF +N Sbjct: 43 SVSEMFPKN 51Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.133 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 379,210 Number of extensions: 645 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |