Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 869 NP_005913 19 869 XP_005267046 19 869 XP_005267045 19 869 NP_057526 17 4312 NP_001185470 17 4312 NP_001035548 17 4312 NP_002438 17 4312 NP_001231866 17 4312 XP_006721082 17 4312 XP_005272073 17 4312 XP_005272072 17 4312 XP_005265227 17 4312 NP_694940 17 4312 NP_001131074 16 5631 NP_057039 16 5631 NP_542172 16 5631 XP_005264409 16 5631 XP_005264408 16 5631 NP_055483 16 7355 NP_001158507 16 7355 NP_055495 16 7355 XP_006722261 16 7355 XP_005258130 16 7355 XP_006713089 16 7355 XP_005246254 16 7355 XP_005246253 16 7355 XP_006711971 16 7355 XP_005246252 16 7355 XP_006711970 16 7355 XP_006711969 16 7355 XP_005246249 16 7355 XP_006711968 16 7355 XP_006711967 16 7355 NP_001004019 16 7355 NP_001989 16 7355 NP_075059 15 9605 NP_054859 15 9605 NP_001127703 15 9605 NP_001120679 15 9605 NP_001073919 15 9605 NP_004790 15 9605 NP_015563 15 9605 NP_653286 15 9605 NP_443078 15 9605 XP_006723099 15 9605 XP_006715596 15 9605 XP_005267137 15 9605 XP_006715595 15 9605 XP_005267136 15 9605 XP_006713368 15 9605 XP_005265463 15 9605 XP_006713367 15 9605 XP_006713366 15 9605 XP_005246688 15 9605 XP_005246689 15 9605>NP_006715 Length = 1558 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 S YVQLSRT Sbjct: 580 SDYVQLSRT 588>NP_005913 Length = 1608 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 S YVQLSRT Sbjct: 580 SDYVQLSRT 588>XP_005267046 Length = 1554 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 S YVQLSRT Sbjct: 580 SDYVQLSRT 588>XP_005267045 Length = 1604 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 S YVQLSRT Sbjct: 580 SDYVQLSRT 588>NP_057526 Length = 948 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SHYVQLSR 8 SH++Q+SR Sbjct: 97 SHHLQISR 104>NP_001185470 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SHYVQLSR 8 SH++Q+SR Sbjct: 97 SHHLQISR 104>NP_001035548 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SHYVQLSR 8 SH++Q+SR Sbjct: 97 SHHLQISR 104>NP_002438 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HYVQLSRT 9 HYVQL T Sbjct: 1352 HYVQLPAT 1359>NP_001231866 Length = 1351 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HYVQLSRT 9 HYVQL T Sbjct: 1303 HYVQLPAT 1310>XP_006721082 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHYVQLSRT 9 SH+ +SRT Sbjct: 103 SHFTMISRT 111>XP_005272073 Length = 951 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SHYVQLSR 8 SH++Q+SR Sbjct: 97 SHHLQISR 104>XP_005272072 Length = 951 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SHYVQLSR 8 SH++Q+SR Sbjct: 97 SHHLQISR 104>XP_005265227 Length = 1401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HYVQLSRT 9 HYVQL T Sbjct: 1353 HYVQLPAT 1360>NP_694940 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHYVQLSRT 9 SH+ +SRT Sbjct: 103 SHFTMISRT 111>NP_001131074 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SHYVQLSR 8 SH+V LSR Sbjct: 57 SHHVPLSR 64>NP_057039 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SHYVQLSR 8 SH+V LSR Sbjct: 80 SHHVPLSR 87>NP_542172 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HYVQLSR 8 HY++LSR Sbjct: 226 HYLRLSR 232>XP_005264409 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SHYVQLSR 8 SH+V LSR Sbjct: 80 SHHVPLSR 87>XP_005264408 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SHYVQLSR 8 SH+V LSR Sbjct: 80 SHHVPLSR 87>NP_055483 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1391 HYLQLS 1396>NP_001158507 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HYVQLSRT 9 +YVQ+S+T Sbjct: 1106 NYVQVSKT 1113>NP_055495 Length = 2235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HYVQLSRT 9 HY QLS T Sbjct: 1318 HYKQLSYT 1325>XP_006722261 Length = 2092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HYVQLSRT 9 HY QLS T Sbjct: 1175 HYKQLSYT 1182>XP_005258130 Length = 2234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HYVQLSRT 9 HY QLS T Sbjct: 1318 HYKQLSYT 1325>XP_006713089 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HYVQLSRT 9 +YVQ+S+T Sbjct: 1067 NYVQVSKT 1074>XP_005246254 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 389 HYLQLS 394>XP_005246253 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 480 HYLQLS 485>XP_006711971 Length = 1517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1391 HYLQLS 1396>XP_005246252 Length = 1850 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1292 HYLQLS 1297>XP_006711970 Length = 1948 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1390 HYLQLS 1395>XP_006711969 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1391 HYLQLS 1396>XP_005246249 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1391 HYLQLS 1396>XP_006711968 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1391 HYLQLS 1396>XP_006711967 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HYVQLS 7 HY+QLS Sbjct: 1391 HYLQLS 1396>NP_001004019 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HYVQLSRT 9 +YVQ+S+T Sbjct: 1106 NYVQVSKT 1113>NP_001989 Length = 1184 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HYVQLSRT 9 +YVQ+S+T Sbjct: 1059 NYVQVSKT 1066>NP_075059 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 137 HYVQL 141>NP_054859 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 SH+++ SRT Sbjct: 551 SHFLKNSRT 559>NP_001127703 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 174 HYVQL 178>NP_001120679 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 SH+++ SRT Sbjct: 551 SHFLKNSRT 559>NP_001073919 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 616 HYVQL 620>NP_004790 Length = 1425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SHYVQLSR 8 +H+VQL R Sbjct: 997 NHFVQLYR 1004>NP_015563 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SHYVQLSR 8 +H+VQL R Sbjct: 938 NHFVQLYR 945>NP_653286 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SHYVQLS 7 +HY QLS Sbjct: 359 THYYQLS 365>NP_443078 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SHYVQLSRT 9 SH QL+RT Sbjct: 726 SHVDQLNRT 734>XP_006723099 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SHYVQLS 7 +HY QLS Sbjct: 359 THYYQLS 365>XP_006715596 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 531 HYVQL 535>XP_005267137 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 616 HYVQL 620>XP_006715595 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 616 HYVQL 620>XP_005267136 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 616 HYVQL 620>XP_006713368 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 7 HYVQL 11>XP_005265463 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 7 HYVQL 11>XP_006713367 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 174 HYVQL 178>XP_006713366 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HYVQL 6 HYVQL Sbjct: 174 HYVQL 178>XP_005246688 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 SH+++ SRT Sbjct: 551 SHFLKNSRT 559>XP_005246689 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SHYVQLSRT 9 SH+++ SRT Sbjct: 551 SHFLKNSRT 559Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.121 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 438,915 Number of extensions: 547 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |