Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 20 509 NP_055296 18 1935 XP_005265948 17 3301 NP_065768 16 5631 XP_006724654 16 5631 XP_006724653 16 5631 NP_001161328 16 7355 NP_060653 16 7355 NP_919226 16 7355 NP_001240756 16 7355 NP_291025 16 7355 XP_005253633 16 7355 XP_005253632 16 7355 XP_006719537 16 7355 XP_006719536 16 7355 XP_005253630 16 7355 XP_005253629 16 7355 NP_060644 16 7355 NP_064630 15 9605 NP_001025054 15 9605 NP_976241 15 9605 NP_998754 15 9605 NP_055917 15 9605 NP_031375 15 9605 NP_001269280 15 9605 NP_001093254 15 9605 XP_005249598 15 9605 XP_005249596 15 9605 XP_005249594 15 9605 XP_005249593 15 9605 XP_005267114 15 9605 XP_005246837 15 9605 XP_005246836 15 9605 XP_006712758 15 9605 XP_005246834 15 9605 XP_006710633 15 9605 XP_006710632 15 9605 XP_006710631 15 9605 XP_006710630 15 9605 XP_006710629 15 9605 XP_006710628 15 9605 XP_006710627 15 9605 XP_006710626 15 9605>NP_443179 Length = 2170 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 S VANKQPS Sbjct: 288 SAVANKQPS 296>NP_055296 Length = 518 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GVANKQPS 9 GVAN++PS Sbjct: 18 GVANQEPS 25>XP_005265948 Length = 273 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VANKQPS 9 VANKQP+ Sbjct: 183 VANKQPA 189>NP_065768 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 S +AN+QPS Sbjct: 520 SELANQQPS 528>XP_006724654 Length = 1335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 S +AN+QPS Sbjct: 362 SELANQQPS 370>XP_006724653 Length = 1377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 S +AN+QPS Sbjct: 404 SELANQQPS 412>NP_001161328 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 807 SGLGSKRPS 815>NP_060653 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 806 SGLGSKRPS 814>NP_919226 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SGVANKQP 8 SG+ N QP Sbjct: 996 SGILNTQP 1003>NP_001240756 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+++ QPS Sbjct: 17 SGLSSSQPS 25>NP_291025 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SGVANKQ 7 SGV NKQ Sbjct: 712 SGVENKQ 718>XP_005253633 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 806 SGLGSKRPS 814>XP_005253632 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 806 SGLGSKRPS 814>XP_006719537 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 807 SGLGSKRPS 815>XP_006719536 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 807 SGLGSKRPS 815>XP_005253630 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 807 SGLGSKRPS 815>XP_005253629 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SG+ +K+PS Sbjct: 807 SGLGSKRPS 815>NP_060644 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVANKQPS 9 GVA K+P+ Sbjct: 500 GVARKEPA 507>NP_064630 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VANKQP 8 +ANKQP Sbjct: 1467 MANKQP 1472>NP_001025054 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVANKQPS 9 G+A +QPS Sbjct: 56 GLAEEQPS 63>NP_976241 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SGV++ QP+ Sbjct: 608 SGVSDTQPA 616>NP_998754 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SGV++ QP+ Sbjct: 556 SGVSDTQPA 564>NP_055917 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 612 ANKQPA 617>NP_031375 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VANKQPS 9 VAN QPS Sbjct: 839 VANVQPS 845>NP_001269280 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SGVANKQP 8 SGV +QP Sbjct: 166 SGVVRRQP 173>NP_001093254 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SGVANKQP 8 SGV +QP Sbjct: 478 SGVVRRQP 485>XP_005249598 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VANKQPS 9 VAN QPS Sbjct: 792 VANVQPS 798>XP_005249596 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VANKQPS 9 VAN QPS Sbjct: 805 VANVQPS 811>XP_005249594 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VANKQPS 9 VAN QPS Sbjct: 805 VANVQPS 811>XP_005249593 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VANKQPS 9 VAN QPS Sbjct: 839 VANVQPS 845>XP_005267114 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VANKQP 8 +ANKQP Sbjct: 1467 MANKQP 1472>XP_005246837 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SGV++ QP+ Sbjct: 583 SGVSDTQPA 591>XP_005246836 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SGV++ QP+ Sbjct: 608 SGVSDTQPA 616>XP_006712758 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SGV++ QP+ Sbjct: 608 SGVSDTQPA 616>XP_005246834 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGVANKQPS 9 SGV++ QP+ Sbjct: 608 SGVSDTQPA 616>XP_006710633 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 436 ANKQPA 441>XP_006710632 Length = 1389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 575 ANKQPA 580>XP_006710631 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 612 ANKQPA 617>XP_006710630 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 612 ANKQPA 617>XP_006710629 Length = 1425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 611 ANKQPA 616>XP_006710628 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 612 ANKQPA 617>XP_006710627 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 612 ANKQPA 617>XP_006710626 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ANKQPS 9 ANKQP+ Sbjct: 612 ANKQPA 617Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.109 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 698,634 Number of extensions: 1314 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |