Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_002178 19 665 NP_001186566 18 1935 NP_001109 18 1935 NP_001186564 18 1935 NP_001186565 18 1935 NP_003250 18 1935 XP_006715710 18 1935 XP_006715709 18 1935 XP_006715708 18 1935 NP_112572 17 3301 NP_075556 17 4312 NP_005631 17 4312 XP_006723675 17 4312 XP_006723674 17 4312 XP_006723673 17 4312 XP_005258397 17 4312 XP_005258396 17 4312 XP_006722591 17 4312 XP_006716203 17 4312 NP_872625 17 4312 NP_060710 16 5631 NP_001273278 16 5631 NP_003732 16 5631 XP_005247908 16 5631 XP_005247907 16 5631 XP_005247906 16 5631 XP_005247905 16 5631 XP_006711493 16 5631 XP_005245363 16 5631 XP_005245362 16 5631 NP_596870 16 7355 NP_001123561 16 7355 NP_115722 16 7355 NP_848555 16 7355 NP_005539 16 7355 XP_005260719 16 7355 XP_006723605 16 7355 XP_006723604 16 7355 NP_000177 15 9605 NP_112571 15 9605 NP_060546 15 9605 NP_001276949 15 9605 NP_000115 15 9605 NP_001182317 15 9605 NP_060952 15 9605 NP_055659 15 9605 NP_001166102 15 9605 NP_001234925 15 9605 NP_874366 15 9605 NP_001171754 15 9605 NP_001171755 15 9605 NP_008836 15 9605 XP_005259124 15 9605 XP_005259123 15 9605 XP_005259122 15 9605 XP_005259121 15 9605 XP_005259120 15 9605 XP_005268303 15 9605 XP_006717517 15 9605 XP_006717516 15 9605 XP_006716630 15 9605 XP_006716629 15 9605 XP_006716628 15 9605 XP_006716627 15 9605 XP_006716626 15 9605 XP_005250982 15 9605 XP_006711345 15 9605 NP_001123640 15 9605 NP_001123639 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE IVVTC Sbjct: 227 SGETIVVTC 235>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE IVVTC Sbjct: 252 SGETIVVTC 260>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE IVVTC Sbjct: 227 SGETIVVTC 235>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE IVVTC Sbjct: 249 SGETIVVTC 257>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE IVVTC Sbjct: 252 SGETIVVTC 260>NP_002178 Length = 328 Score = 19.2 bits (38), Expect = 665 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM+V+TC Sbjct: 43 GEMVVLTC 50>NP_001186566 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_001109 Length = 468 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_001186564 Length = 496 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_001186565 Length = 495 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_003250 Length = 924 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GEMIVVTC 9 G+M+ VTC Sbjct: 337 GQMVTVTC 344>XP_006715710 Length = 475 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>XP_006715709 Length = 489 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>XP_006715708 Length = 496 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEMIVVTC 9 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_112572 Length = 515 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GEMIVVTC 9 GEM+V+ C Sbjct: 303 GEMLVLVC 310Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 37 GERVTLTC 44>NP_075556 Length = 1709 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEMIVVTC 9 GE++ +TC Sbjct: 255 GELVTLTC 262>NP_005631 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SGEMIVVTC 9 S +M++ TC Sbjct: 349 SSDMVIATC 357>XP_006723675 Length = 1623 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEMIVVTC 9 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_006723674 Length = 1701 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEMIVVTC 9 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_006723673 Length = 1709 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEMIVVTC 9 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_005258397 Length = 618 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SGEMIVVTC 9 S +M++ TC Sbjct: 349 SSDMVIATC 357>XP_005258396 Length = 625 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SGEMIVVTC 9 S +M++ TC Sbjct: 349 SSDMVIATC 357>XP_006722591 Length = 827 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SGEMIVVTC 9 S +M++ TC Sbjct: 349 SSDMVIATC 357>XP_006716203 Length = 276 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGEMIVVT 8 SG MIV+T Sbjct: 195 SGSMIVIT 202>NP_872625 Length = 276 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGEMIVVT 8 SG MIV+T Sbjct: 195 SGSMIVIT 202>NP_060710 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE +V TC Sbjct: 237 GERVVFTC 244>NP_001273278 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE +V TC Sbjct: 137 GERVVFTC 144>NP_003732 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GEM +TC Sbjct: 893 GEMSCITC 900>XP_005247908 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GEM +TC Sbjct: 832 GEMSCITC 839>XP_005247907 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GEM +TC Sbjct: 893 GEMSCITC 900>XP_005247906 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GEM +TC Sbjct: 920 GEMSCITC 927>XP_005247905 Length = 982 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GEM +TC Sbjct: 920 GEMSCITC 927>XP_006711493 Length = 673 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE +V TC Sbjct: 137 GERVVFTC 144>XP_005245363 Length = 723 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE +V TC Sbjct: 187 GERVVFTC 194>XP_005245362 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE +V TC Sbjct: 237 GERVVFTC 244>NP_596870 Length = 5604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE +V TC Sbjct: 3518 GEPVVFTC 3525>NP_001123561 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + VTC Sbjct: 477 GEFLEVTC 484>NP_115722 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SGEMIVVTC 9 SGE + +TC Sbjct: 270 SGEPLFLTC 278>NP_848555 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 +GE I+++C Sbjct: 43 TGESIILSC 51>NP_005539 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + VTC Sbjct: 449 GEFLEVTC 456>XP_005260719 Length = 145 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 +GE I+++C Sbjct: 43 TGESIILSC 51>XP_006723605 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 +GE I+++C Sbjct: 21 TGESIILSC 29>XP_006723604 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 +GE I+++C Sbjct: 43 TGESIILSC 51>NP_000177 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 SGEMIVVTC 9 +GE + TC Sbjct: 1010 AGEQVTYTC 1018>NP_112571 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 37 GERVTLTC 44>NP_060546 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 257 GETLCITC 264>NP_001276949 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 257 GETLCITC 264>NP_000115 Length = 1493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SGEMIVV 7 SG+MIVV Sbjct: 838 SGKMIVV 844>NP_001182317 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 37 GERVTLTC 44>NP_060952 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1091 GEVIIVT 1097>NP_055659 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SG+++ V+C Sbjct: 326 SGDIVSVSC 334>NP_001166102 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SG+++ V+C Sbjct: 326 SGDIVSVSC 334>NP_001234925 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1084 GEVIIVT 1090>NP_874366 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 346 SGEVLYLSC 354>NP_001171754 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 346 SGEVLYLSC 354>NP_001171755 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 346 SGEVLYLSC 354>NP_008836 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 346 SGEVLYLSC 354>XP_005259124 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 218 SGEVLYLSC 226>XP_005259123 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 224 SGEVLYLSC 232>XP_005259122 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 253 SGEVLYLSC 261>XP_005259121 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 326 SGEVLYLSC 334>XP_005259120 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 346 SGEVLYLSC 354>XP_005268303 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SG+++ V+C Sbjct: 326 SGDIVSVSC 334>XP_006717517 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 140 GETLCITC 147>XP_006717516 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GEMIVVTC 9 GE + +TC Sbjct: 257 GETLCITC 264>XP_006716630 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1035 GEVIIVT 1041>XP_006716629 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1037 GEVIIVT 1043>XP_006716628 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1038 GEVIIVT 1044>XP_006716627 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1087 GEVIIVT 1093>XP_006716626 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1094 GEVIIVT 1100>XP_005250982 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEMIVVT 8 GE+I+VT Sbjct: 1094 GEVIIVT 1100>XP_006711345 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 SGEMIVVTC 9 +GE + TC Sbjct: 952 AGEQVTYTC 960>NP_001123640 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 224 SGEVLYLSC 232>NP_001123639 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGEMIVVTC 9 SGE++ ++C Sbjct: 346 SGEVLYLSC 354Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.134 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 483,971 Number of extensions: 1400 Number of successful extensions: 75 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |