Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_001600 17 3301 NP_001257628 16 5631 NP_001257625 16 5631 NP_001257626 16 5631 NP_001257627 16 5631 NP_001257624 16 5631 NP_060757 16 5631 XP_005252701 16 5631 XP_006717604 16 5631 XP_006717603 16 5631 NP_005973 16 7355 NP_000176 16 7355 NP_001139659 16 7355 NP_001139658 16 7355 NP_001139656 16 7355 NP_006201 16 7355 NP_001139657 16 7355 NP_058628 16 7355 NP_008987 16 7355 NP_001265368 16 7355 XP_005261654 16 7355 XP_006716413 16 7355 XP_006716411 16 7355 XP_006716410 16 7355 XP_006716409 16 7355 XP_006716408 16 7355 XP_006716407 16 7355 XP_006716406 16 7355 XP_006716405 16 7355 XP_006716404 16 7355 XP_006716403 16 7355 XP_006716402 16 7355 XP_006716401 16 7355 XP_006716400 16 7355 XP_006716399 16 7355 XP_005264157 16 7355 NP_001121084 15 9605 NP_000271 15 9605 NP_001010872 15 9605 NP_001245394 15 9605 NP_001245393 15 9605 NP_001245391 15 9605 NP_001245392 15 9605 NP_001595 15 9605 XP_005253015 15 9605 XP_006718309 15 9605 XP_006718308 15 9605 XP_006718307 15 9605 XP_005253014 15 9605 XP_005253013 15 9605 XP_005253012 15 9605 XP_005253011 15 9605 XP_006715085 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 73 SFTQEQVAD 81>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 73 SFTQEQVAD 81>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 73 SFTQEQVAD 81>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 73 SFTQEQVAD 81>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 66 SFTQEQVAD 74>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 66 SFTQEQVAD 74>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 SF QEQVAD Sbjct: 73 SFTQEQVAD 81>NP_001600 Length = 432 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FAQEQVA 8 FAQEQ+A Sbjct: 71 FAQEQIA 77>NP_001257628 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>NP_001257625 Length = 816 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>NP_001257626 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>NP_001257627 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>NP_001257624 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>NP_060757 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>XP_005252701 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>XP_006717604 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>XP_006717603 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFAQEQVAD 9 SF+QEQ D Sbjct: 192 SFSQEQSCD 200>NP_005973 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAQEQVA 8 F QEQVA Sbjct: 9 FTQEQVA 15>NP_000176 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FAQEQVAD 9 FA+ Q+AD Sbjct: 245 FAEAQIAD 252>NP_001139659 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 S+AQEQ A Sbjct: 894 SYAQEQYA 901>NP_001139658 Length = 1588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 S+AQEQ A Sbjct: 1018 SYAQEQYA 1025>NP_001139656 Length = 1588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 S+AQEQ A Sbjct: 1018 SYAQEQYA 1025>NP_006201 Length = 1588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 S+AQEQ A Sbjct: 1018 SYAQEQYA 1025>NP_001139657 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 S+AQEQ A Sbjct: 892 SYAQEQYA 899>NP_058628 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAQEQVA 8 F QEQVA Sbjct: 9 FTQEQVA 15>NP_008987 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QEQVAD 9 QEQVAD Sbjct: 215 QEQVAD 220>NP_001265368 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QEQVAD 9 QEQVAD Sbjct: 153 QEQVAD 158>XP_005261654 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FAQEQVAD 9 FA+ Q+AD Sbjct: 273 FAEAQIAD 280>XP_006716413 Length = 1598 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716411 Length = 2064 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716410 Length = 2072 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716409 Length = 2076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716408 Length = 2117 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 287 SASQEQVSD 295>XP_006716407 Length = 2126 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716406 Length = 2131 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716405 Length = 2138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716404 Length = 2142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716403 Length = 2146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716402 Length = 2149 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716401 Length = 2150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716400 Length = 2150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_006716399 Length = 2150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFAQEQVAD 9 S +QEQV+D Sbjct: 320 SASQEQVSD 328>XP_005264157 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAQEQVA 8 F QEQVA Sbjct: 9 FTQEQVA 15>NP_001121084 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 216 SFTQEQI 222>NP_000271 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 216 SFTQEQI 222>NP_001010872 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 SFAQE+ A Sbjct: 285 SFAQEESA 292>NP_001245394 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 216 SFTQEQI 222>NP_001245393 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 216 SFTQEQI 222>NP_001245391 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 230 SFTQEQI 236>NP_001245392 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 230 SFTQEQI 236>NP_001595 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 230 SFTQEQI 236>XP_005253015 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 80 SFTQEQI 86>XP_006718309 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 149 SFTQEQI 155>XP_006718308 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 163 SFTQEQI 169>XP_006718307 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 171 SFTQEQI 177>XP_005253014 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 230 SFTQEQI 236>XP_005253013 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 216 SFTQEQI 222>XP_005253012 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 216 SFTQEQI 222>XP_005253011 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SFAQEQV 7 SF QEQ+ Sbjct: 230 SFTQEQI 236>XP_006715085 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFAQEQVA 8 SFAQE+ A Sbjct: 285 SFAQEESA 292Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.115 0.281 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,229 Number of extensions: 660 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |