Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_001119580 17 3301 NP_000330 17 3301 NP_001119579 17 3301 NP_112477 17 3301 NP_001243298 17 3301 XP_005256176 17 3301 NP_006632 17 3301 NP_001185624 17 4312 NP_002395 17 4312 NP_001138828 17 4312 NP_001138827 17 4312 NP_001078926 17 4312 NP_001273764 17 4312 NP_001020087 17 4312 NP_060961 17 4312 NP_958861 17 4312 XP_006726563 17 4312 XP_006717179 17 4312 XP_005277697 17 4312 XP_005277696 17 4312 XP_005252048 17 4312 XP_005277694 17 4312 XP_006716977 17 4312 XP_005272808 17 4312 XP_005272807 17 4312 XP_005272806 17 4312 XP_005272805 17 4312 XP_006716911 17 4312 XP_005251573 17 4312 XP_005251572 17 4312 XP_005251571 17 4312 XP_005251570 17 4312 XP_005263662 17 4312 XP_005263661 17 4312 XP_005263660 17 4312 XP_005263659 17 4312 XP_005263657 17 4312 XP_006710801 17 4312 NP_742000 17 4312 NP_003605 17 4312 NP_005679 16 5631 XP_006726564 16 5631 XP_006716913 16 5631 XP_006716912 16 5631 XP_005247116 16 5631 XP_005247115 16 5631 NP_001129977 16 7355 NP_071429 16 7355 XP_006721240 16 7355 NP_871001 16 7355 NP_005281 15 9605 NP_150598 15 9605 NP_001025186 15 9605 NP_037363 15 9605 NP_065392 15 9605 NP_001533 15 9605 NP_003807 15 9605 NP_001007238 15 9605 XP_006720158 15 9605 XP_005267547 15 9605 XP_005267546 15 9605 XP_005270851 15 9605 XP_005270850 15 9605 XP_006710656 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DMFIQNLA 9 DMFIQNLA Sbjct: 2657 DMFIQNLA 2664>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DMFIQNLA 9 DMFIQNLA Sbjct: 2452 DMFIQNLA 2459>NP_001119580 Length = 1021 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 +D+F+QNL Sbjct: 322 ADIFVQNL 329>NP_000330 Length = 1030 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 +D+F+QNL Sbjct: 322 ADIFVQNL 329>NP_001119579 Length = 1029 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 +D+F+QNL Sbjct: 321 ADIFVQNL 328>NP_112477 Length = 369 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 +DMF+ NLA Sbjct: 83 TDMFLLNLA 91>NP_001243298 Length = 357 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 +DMF+ NLA Sbjct: 71 TDMFLLNLA 79>XP_005256176 Length = 1020 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 +D+F+QNL Sbjct: 321 ADIFVQNL 328>NP_006632 Length = 357 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 +DMF+ NLA Sbjct: 71 TDMFLLNLA 79>NP_001185624 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DMFIQNLA 9 D+F+QN A Sbjct: 217 DLFVQNCA 224>NP_002395 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DMFIQNLA 9 D+F+QN A Sbjct: 193 DLFVQNCA 200>NP_001138828 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 272 NMFIQNL 278>NP_001138827 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 255 NMFIQNL 261>NP_001078926 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>NP_001273764 Length = 176 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 72 NMFIQNL 78>NP_001020087 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 243 NMFIQNL 249>NP_060961 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>NP_958861 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>XP_006726563 Length = 176 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 72 NMFIQNL 78>XP_006717179 Length = 320 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>XP_005277697 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 243 NMFIQNL 249>XP_005277696 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 262 NMFIQNL 268>XP_005252048 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 271 NMFIQNL 277>XP_005277694 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 272 NMFIQNL 278>XP_006716977 Length = 320 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>XP_005272808 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 262 NMFIQNL 268>XP_005272807 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 271 NMFIQNL 277>XP_005272806 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 272 NMFIQNL 278>XP_005272805 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>XP_006716911 Length = 176 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 72 NMFIQNL 78>XP_005251573 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 236 NMFIQNL 242>XP_005251572 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 243 NMFIQNL 249>XP_005251571 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 262 NMFIQNL 268>XP_005251570 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 271 NMFIQNL 277>XP_005263662 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 236 NMFIQNL 242>XP_005263661 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 243 NMFIQNL 249>XP_005263660 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 255 NMFIQNL 261>XP_005263659 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 262 NMFIQNL 268>XP_005263657 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 272 NMFIQNL 278>XP_006710801 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SDMFIQNLA 9 S++F+QNL+ Sbjct: 361 SNLFLQNLS 369>NP_742000 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DMFIQNL 8 +MFIQNL Sbjct: 291 NMFIQNL 297>NP_003605 Length = 368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 +D+FI NLA Sbjct: 57 TDLFILNLA 65>NP_005679 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 ++MFIQN+ Sbjct: 990 AEMFIQNV 997>XP_006726564 Length = 104 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MFIQNL 8 MFIQNL Sbjct: 1 MFIQNL 6>XP_006716913 Length = 104 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MFIQNL 8 MFIQNL Sbjct: 1 MFIQNL 6>XP_006716912 Length = 104 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MFIQNL 8 MFIQNL Sbjct: 1 MFIQNL 6>XP_005247116 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 ++MFIQN+ Sbjct: 990 AEMFIQNV 997>XP_005247115 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 ++MFIQN+ Sbjct: 990 AEMFIQNV 997>NP_001129977 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 MF++NLA Sbjct: 61 MFVKNLA 67>NP_071429 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 ++MFI NLA Sbjct: 78 TNMFILNLA 86>XP_006721240 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 MF++NLA Sbjct: 61 MFVKNLA 67>NP_871001 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDMFIQNLA 9 SD F+ NLA Sbjct: 76 SDTFVFNLA 84>NP_005281 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMFIQNLA 9 D+FI NLA Sbjct: 69 DIFIINLA 76>NP_150598 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 ++MFI NLA Sbjct: 105 ANMFIINLA 113>NP_001025186 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SDMFIQNLA 9 ++MFI NLA Sbjct: 116 ANMFIINLA 124>NP_037363 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SDMFIQNL 8 SDM QNL Sbjct: 196 SDMAFQNL 203>NP_065392 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 SDMFIQNL 8 +D+F++N+ Sbjct: 294 ADLFVENM 301>NP_001533 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 +FIQN+A Sbjct: 923 LFIQNVA 929>NP_003807 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DMFIQN 7 D+FIQN Sbjct: 496 DVFIQN 501>NP_001007238 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 +FIQN+A Sbjct: 903 LFIQNVA 909>XP_006720158 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SDMFIQNL 8 SDM QNL Sbjct: 196 SDMAFQNL 203>XP_005267547 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SDMFIQNL 8 SDM QNL Sbjct: 196 SDMAFQNL 203>XP_005267546 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SDMFIQNL 8 SDM QNL Sbjct: 196 SDMAFQNL 203>XP_005270851 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 +FIQN+A Sbjct: 908 LFIQNVA 914>XP_005270850 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 +FIQN+A Sbjct: 923 LFIQNVA 929>XP_006710656 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MFIQNLA 9 +FIQN+A Sbjct: 928 LFIQNVA 934Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.135 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,722 Number of extensions: 728 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |