Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000206 17 4312 XP_006722808 17 4312 XP_005259953 17 4312 XP_005254804 17 4312 XP_006720791 17 4312 XP_005254803 17 4312 XP_005254800 17 4312 XP_005254799 17 4312 NP_003913 17 4312 NP_000159 16 5631 XP_005249761 16 5631 XP_005249760 16 5631 XP_006713927 16 5631 NP_660334 16 5631 NP_001167639 16 7355 NP_001167638 16 7355 NP_001128524 16 7355 NP_003168 16 7355 NP_115627 16 7355 NP_001131136 16 7355 NP_057322 16 7355 XP_005253960 16 7355 XP_006719513 16 7355 XP_006718582 16 7355 XP_005252204 16 7355 NP_000278 15 9605 NP_004000 15 9605 NP_004001 15 9605 NP_003997 15 9605 NP_000100 15 9605 NP_056207 15 9605 XP_006724538 15 9605 XP_006724537 15 9605 XP_006724536 15 9605 XP_006724535 15 9605 XP_006724534 15 9605 XP_006724533 15 9605 XP_006724532 15 9605 XP_006724531 15 9605>NP_000206 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGLALIRV 9 DGL L+RV Sbjct: 266 DGLGLLRV 273>XP_006722808 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGLALIRV 9 DGL L+RV Sbjct: 266 DGLGLLRV 273>XP_005259953 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGLALIRV 9 DGL L+RV Sbjct: 309 DGLGLLRV 316>XP_005254804 Length = 4796 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 SDGLAL+ Sbjct: 3692 SDGLALV 3698>XP_006720791 Length = 4853 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 SDGLAL+ Sbjct: 3749 SDGLALV 3755>XP_005254803 Length = 4854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 SDGLAL+ Sbjct: 3750 SDGLALV 3756>XP_005254800 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 SDGLAL+ Sbjct: 3757 SDGLALV 3763>XP_005254799 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 SDGLAL+ Sbjct: 3757 SDGLALV 3763>NP_003913 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 SDGLAL+ Sbjct: 3757 SDGLALV 3763>NP_000159 Length = 1580 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SDGLALIRV 9 S+GLAL RV Sbjct: 1013 SEGLALPRV 1021>XP_005249761 Length = 1580 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SDGLALIRV 9 S+GLAL RV Sbjct: 1013 SEGLALPRV 1021>XP_005249760 Length = 1580 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SDGLALIRV 9 S+GLAL RV Sbjct: 1013 SEGLALPRV 1021>XP_006713927 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDGLALIR 8 +DG+A+IR Sbjct: 706 ADGMAMIR 713>NP_660334 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SDGLALIR 8 +DG+A+IR Sbjct: 706 ADGMAMIR 713>NP_001167639 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDGLALIR 8 SDGL L+R Sbjct: 35 SDGLYLLR 42>NP_001167638 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDGLALIR 8 SDGL L+R Sbjct: 35 SDGLYLLR 42>NP_001128524 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDGLALIR 8 SDGL L+R Sbjct: 35 SDGLYLLR 42>NP_003168 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDGLALIR 8 SDGL L+R Sbjct: 35 SDGLYLLR 42>NP_115627 Length = 1476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDGLALIRV 9 SDG L+RV Sbjct: 57 SDGALLLRV 65>NP_001131136 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DGLALIR 8 DG+AL+R Sbjct: 494 DGIALLR 500>NP_057322 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DGLALIR 8 DG+AL+R Sbjct: 494 DGIALLR 500>XP_005253960 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DGLALIR 8 DG+AL+R Sbjct: 273 DGIALLR 279>XP_006719513 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DGLALIR 8 DG+AL+R Sbjct: 447 DGIALLR 453>XP_006718582 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDGLALIRV 9 SDG L+RV Sbjct: 57 SDGALLLRV 65>XP_005252204 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDGLALIR 8 SDGL L+R Sbjct: 35 SDGLYLLR 42>NP_000278 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SDGLALI 7 +DGLAL+ Sbjct: 267 ADGLALV 273>NP_004000 Length = 3681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 160 SDGLAL 165>NP_004001 Length = 3562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 41 SDGLAL 46>NP_003997 Length = 3685 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>NP_000100 Length = 3677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 156 SDGLAL 161>NP_056207 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGLALIRV 9 DGLAL+ + Sbjct: 181 DGLALVLI 188>XP_006724538 Length = 3575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>XP_006724537 Length = 3593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>XP_006724536 Length = 3657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>XP_006724535 Length = 3660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>XP_006724534 Length = 3668 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>XP_006724533 Length = 3690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169>XP_006724532 Length = 3695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 156 SDGLAL 161>XP_006724531 Length = 3703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SDGLAL 6 SDGLAL Sbjct: 164 SDGLAL 169Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.147 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,938 Number of extensions: 657 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |