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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001013433                                                           18    1482
NP_060785                                                              18    1482
NP_361014                                                              18    1482
NP_001277251                                                           17    3301
NP_005500                                                              17    3301
NP_001277250                                                           17    3301
XP_005271970                                                           17    3301
XP_005271969                                                           17    3301
XP_005271967                                                           17    3301
XP_005271966                                                           17    3301
NP_056078                                                              16    7355
NP_001167587                                                           16    7355
NP_001167588                                                           16    7355
XP_005254313                                                           16    7355
XP_005254312                                                           16    7355
XP_005249698                                                           16    7355
NP_001129396                                                           16    7355
NP_001036212                                                           15    9605
NP_001036194                                                           15    9605
NP_005239                                                              15    9605
XP_006710515                                                           15    9605

>NP_001013433
          Length = 589

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SAVTRLQFN 9
           SAVT LQFN
Sbjct: 507 SAVTCLQFN 515



>NP_060785
          Length = 627

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SAVTRLQFN 9
           SAVT LQFN
Sbjct: 545 SAVTCLQFN 553



>NP_361014
          Length = 707

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SAVTRLQFN 9
           SAVT LQFN
Sbjct: 625 SAVTCLQFN 633



>NP_001277251
          Length = 2854

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2615 SRVTRMRFN 2623



>NP_005500
          Length = 3027

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2788 SRVTRMRFN 2796



>NP_001277250
          Length = 3048

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2809 SRVTRMRFN 2817



>XP_005271970
          Length = 2931

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2847 SRVTRMRFN 2855



>XP_005271969
          Length = 3020

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2781 SRVTRMRFN 2789



>XP_005271967
          Length = 3065

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2826 SRVTRMRFN 2834



>XP_005271966
          Length = 3086

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    SAVTRLQFN 9
            S VTR++FN
Sbjct: 2847 SRVTRMRFN 2855



>NP_056078
          Length = 3036

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    VTRLQFN 9
            VTRL FN
Sbjct: 2809 VTRLYFN 2815



>NP_001167587
          Length = 3037

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    VTRLQFN 9
            VTRL FN
Sbjct: 2810 VTRLYFN 2816



>NP_001167588
          Length = 2400

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    VTRLQFN 9
            VTRL FN
Sbjct: 2173 VTRLYFN 2179



>XP_005254313
          Length = 3057

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    VTRLQFN 9
            VTRL FN
Sbjct: 2830 VTRLYFN 2836



>XP_005254312
          Length = 3058

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    VTRLQFN 9
            VTRL FN
Sbjct: 2831 VTRLYFN 2837



>XP_005249698
          Length = 1044

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VTRLQFN 9
           VT+LQ+N
Sbjct: 416 VTKLQYN 422



>NP_001129396
          Length = 1590

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VTRLQFN 9
           VT+LQ+N
Sbjct: 962 VTKLQYN 968



>NP_001036212
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TRLQFN 9
           TR+QFN
Sbjct: 212 TRVQFN 217



>NP_001036194
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TRLQFN 9
           TR+QFN
Sbjct: 212 TRVQFN 217



>NP_005239
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TRLQFN 9
           TR+QFN
Sbjct: 212 TRVQFN 217



>XP_006710515
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TRLQFN 9
           TR+QFN
Sbjct: 212 TRVQFN 217



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.326    0.126    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 313,489
Number of extensions: 322
Number of successful extensions: 21
Number of sequences better than 10000.0: 21
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 21
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)