Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_660333 17 4312 NP_149039 17 4312 NP_079272 17 4312 XP_006713858 17 4312 NP_055318 16 5631 XP_006719406 16 5631 NP_061744 16 7355 NP_114478 16 7355 NP_000236 15 9605 NP_001120972 15 9605 NP_079235 15 9605 XP_006719671 15 9605 XP_006719670 15 9605 XP_006716054 15 9605 XP_006716053 15 9605 XP_006716052 15 9605 XP_006716051 15 9605 NP_835462 15 9605 NP_001004460 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1386 SAMFLRFIN 1394>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1407 SAMFLRFIN 1415>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1417 SAMFLRFIN 1425>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1417 SAMFLRFIN 1425>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1417 SAMFLRFIN 1425>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1386 SAMFLRFIN 1394>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1396 SAMFLRFIN 1404>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1417 SAMFLRFIN 1425>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1404 SAMFLRFIN 1412>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1407 SAMFLRFIN 1415>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 SAMFL FIN Sbjct: 1417 SAMFLRFIN 1425>NP_660333 Length = 1321 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMFLTFIN 9 A F+TF+N Sbjct: 924 ASFITFVN 931>NP_149039 Length = 334 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMFLTFIN 9 S +FLTFI+ Sbjct: 109 SILFLTFIS 117>NP_079272 Length = 751 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLTFIN 9 FLTFIN Sbjct: 169 FLTFIN 174>XP_006713858 Length = 712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLTFIN 9 FLTFIN Sbjct: 169 FLTFIN 174>NP_055318 Length = 2785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMFLTFIN 9 S +FL FIN Sbjct: 843 SPLFLRFIN 851>XP_006719406 Length = 2380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMFLTFIN 9 S +FL FIN Sbjct: 843 SPLFLRFIN 851>NP_061744 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 S +FLTF+ Sbjct: 701 SCVFLTFV 708>NP_114478 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 S +FLTF+ Sbjct: 701 SCVFLTFV 708>NP_000236 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 SA+F TFI Sbjct: 1338 SAIFSTFI 1345>NP_001120972 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 SA+F TFI Sbjct: 1356 SAIFSTFI 1363>NP_079235 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMFLTFI 8 A+FLTF+ Sbjct: 212 AVFLTFL 218>XP_006719671 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMFLTFI 8 A+FLTF+ Sbjct: 212 AVFLTFL 218>XP_006719670 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMFLTFI 8 A+FLTF+ Sbjct: 17 AVFLTFL 23>XP_006716054 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 SA+F TFI Sbjct: 908 SAIFSTFI 915>XP_006716053 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 SA+F TFI Sbjct: 908 SAIFSTFI 915>XP_006716052 Length = 1409 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 SA+F TFI Sbjct: 1357 SAIFSTFI 1364>XP_006716051 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 SA+F TFI Sbjct: 1375 SAIFSTFI 1382>NP_835462 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 S +FLTF+ Sbjct: 26 SLLFLTFL 33>NP_001004460 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMFLTFI 8 S +FLTF+ Sbjct: 12 SLLFLTFL 19Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.142 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 256,410 Number of extensions: 388 Number of successful extensions: 30 Number of sequences better than 10000.0: 30 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |