Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136098 19 665 NP_000360 19 665 NP_001018046 19 665 XP_005268096 19 665 XP_006720308 19 665 XP_005268094 19 665 NP_064599 17 3301 XP_005254616 17 3301 XP_005254615 17 3301 XP_005254614 17 3301 NP_005329 17 4312 XP_005250362 17 4312 XP_005250361 17 4312 NP_001161401 16 5631 NP_002173 16 5631 NP_001161403 16 5631 NP_001161400 16 5631 NP_001161402 16 5631 NP_608273 16 5631 XP_005247491 16 5631 XP_005247490 16 5631 NP_065783 16 7355 NP_892006 16 7355 NP_059989 16 7355 NP_149062 16 7355 NP_064627 16 7355 NP_001157888 16 7355 NP_001271210 16 7355 XP_006724703 16 7355 XP_005267899 16 7355 XP_006720257 16 7355 XP_006715590 16 7355 XP_005267126 16 7355 XP_006715589 16 7355 XP_006715588 16 7355 XP_006715587 16 7355 XP_006715586 16 7355 XP_006715488 16 7355 XP_006715487 16 7355 XP_006715486 16 7355 XP_006715485 16 7355 XP_006715484 16 7355 XP_006715483 16 7355 XP_006715482 16 7355 XP_006715481 16 7355 XP_006715480 16 7355 XP_006715479 16 7355 XP_006715478 16 7355 XP_006715477 16 7355 XP_006715476 16 7355 XP_006715475 16 7355 XP_006715474 16 7355 XP_006715473 16 7355 XP_006715472 16 7355 XP_006715471 16 7355 XP_006715470 16 7355 XP_006713327 16 7355 XP_006713325 16 7355 XP_006713324 16 7355 XP_005265385 16 7355 NP_000375 15 9605 NP_006266 15 9605 NP_001161842 15 9605 NP_001074260 15 9605 NP_055595 15 9605 NP_001276061 15 9605 NP_443081 15 9605 NP_001922 15 9605 NP_037374 15 9605 NP_006769 15 9605 NP_001074261 15 9605 XP_006715348 15 9605 XP_005249560 15 9605>NP_001136098 Length = 274 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 RVT KDIQR Sbjct: 38 RVTCKDIQR 46>NP_000360 Length = 764 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 RVT KDIQR Sbjct: 38 RVTCKDIQR 46>NP_001018046 Length = 253 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 RVT KDIQR Sbjct: 38 RVTCKDIQR 46>XP_005268096 Length = 253 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 RVT KDIQR Sbjct: 38 RVTCKDIQR 46>XP_006720308 Length = 274 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 RVT KDIQR Sbjct: 38 RVTCKDIQR 46>XP_005268094 Length = 764 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 RVT KDIQR Sbjct: 38 RVTCKDIQR 46>NP_064599 Length = 630 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTSKDIQR 9 +TSKD+Q+ Sbjct: 570 ITSKDLQK 577>XP_005254616 Length = 610 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTSKDIQR 9 +TSKD+Q+ Sbjct: 550 ITSKDLQK 557>XP_005254615 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTSKDIQR 9 +TSKD+Q+ Sbjct: 551 ITSKDLQK 558>XP_005254614 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTSKDIQR 9 +TSKD+Q+ Sbjct: 571 ITSKDLQK 578>NP_005329 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 V SKD+QR Sbjct: 839 VASKDLQR 846>XP_005250362 Length = 1003 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 V SKD+QR Sbjct: 805 VASKDLQR 812>XP_005250361 Length = 1008 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 V SKD+QR Sbjct: 810 VASKDLQR 817>NP_001161401 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>NP_002173 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>NP_001161403 Length = 687 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>NP_001161400 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>NP_001161402 Length = 356 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>NP_608273 Length = 356 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>XP_005247491 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 126 KVTSEDLKR 134>XP_005247490 Length = 687 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVTSKDIQR 9 +VTS+D++R Sbjct: 320 KVTSEDLKR 328>NP_065783 Length = 2249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1625 KITSKDI 1631>NP_892006 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4105 KTTAKDIQQ 4113>NP_059989 Length = 2236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1612 KITSKDI 1618>NP_149062 Length = 8749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4034 KTTAKDIQQ 4042>NP_064627 Length = 1388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 R+ S+DI+R Sbjct: 1050 RILSEDIER 1058>NP_001157888 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTSKDIQ 8 +TS+DIQ Sbjct: 112 ITSRDIQ 118>NP_001271210 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 179 KITSKDI 185>XP_006724703 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTSKDIQ 8 +TS+DIQ Sbjct: 112 ITSRDIQ 118>XP_005267899 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 418 KITSKDI 424>XP_006720257 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 418 KITSKDI 424>XP_006715590 Length = 2277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1653 KITSKDI 1659>XP_005267126 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1692 KITSKDI 1698>XP_006715589 Length = 2320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1696 KITSKDI 1702>XP_006715588 Length = 2330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1706 KITSKDI 1712>XP_006715587 Length = 2359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1735 KITSKDI 1741>XP_006715586 Length = 2373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVTSKDI 7 ++TSKDI Sbjct: 1749 KITSKDI 1755>XP_006715488 Length = 8721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715487 Length = 8744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715486 Length = 8758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715485 Length = 8793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4059 KTTAKDIQQ 4067>XP_006715484 Length = 8794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4060 KTTAKDIQQ 4068>XP_006715483 Length = 8795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715482 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4105 KTTAKDIQQ 4113>XP_006715481 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4065 KTTAKDIQQ 4073>XP_006715480 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715479 Length = 8804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715478 Length = 8809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715477 Length = 8822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4088 KTTAKDIQQ 4096>XP_006715476 Length = 8823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715475 Length = 8827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715474 Length = 8829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4095 KTTAKDIQQ 4103>XP_006715473 Length = 8832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715472 Length = 8839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4105 KTTAKDIQQ 4113>XP_006715471 Length = 8842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006715470 Length = 8846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 + T+KDIQ+ Sbjct: 4112 KTTAKDIQQ 4120>XP_006713327 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 R+ S+DI+R Sbjct: 685 RILSEDIER 693>XP_006713325 Length = 1195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 R+ S+DI+R Sbjct: 1050 RILSEDIER 1058>XP_006713324 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 R+ S+DI+R Sbjct: 1050 RILSEDIER 1058>XP_005265385 Length = 1291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVTSKDIQR 9 R+ S+DI+R Sbjct: 953 RILSEDIER 961>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVTSKDIQ 8 R+T DIQ Sbjct: 2150 RITENDIQ 2157>NP_006266 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTSKDIQR 9 V KDIQR Sbjct: 13 VREKDIQR 20>NP_001161842 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TSKDIQR 9 TSK++QR Sbjct: 1394 TSKELQR 1400>NP_001074260 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 VTSKD+ R Sbjct: 104 VTSKDMLR 111>NP_055595 Length = 1698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TSKDIQR 9 TSK++QR Sbjct: 1310 TSKELQR 1316>NP_001276061 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 VTSKD+ R Sbjct: 95 VTSKDMLR 102>NP_443081 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 VTSKD+ R Sbjct: 95 VTSKDMLR 102>NP_001922 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RVTSKDI 7 R+T KDI Sbjct: 383 RITKKDI 389>NP_037374 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVTSKDIQ 8 R+T DIQ Sbjct: 36 RITDNDIQ 43>NP_006769 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 V S+D+QR Sbjct: 383 VVSEDVQR 390>NP_001074261 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTSKDIQR 9 VTSKD+ R Sbjct: 95 VTSKDMLR 102>XP_006715348 Length = 1734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TSKDIQR 9 TSK++QR Sbjct: 1342 TSKELQR 1348>XP_005249560 Length = 1750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TSKDIQR 9 TSK++QR Sbjct: 1362 TSKELQR 1368Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.128 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,227 Number of extensions: 588 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |