Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001137429 17 2528 NP_110411 17 2528 XP_006715633 17 2528 XP_006715632 17 2528 NP_001275655 16 7355 NP_001121138 16 7355 NP_001121139 16 7355 NP_001121137 16 7355 NP_001121135 16 7355 NP_001121134 16 7355 NP_653235 16 7355 NP_001244959 16 7355 NP_001244958 16 7355 XP_005252002 16 7355 XP_005252001 16 7355 XP_006717142 16 7355 XP_005252000 16 7355 XP_006717141 16 7355 XP_006717140 16 7355 XP_006717139 16 7355 XP_005251997 16 7355 XP_006717138 16 7355 XP_005264922 16 7355 XP_006713031 16 7355 NP_001121136 16 7355 NP_000168 16 7355 NP_937895 16 7355 NP_689935 15 9605 NP_659403 15 9605 NP_001171175 15 9605 NP_002821 15 9605 NP_001035888 15 9605 NP_004198 15 9605 NP_001193880 15 9605 NP_001193881 15 9605 NP_001035887 15 9605 NP_001193879 15 9605 NP_001135778 15 9605 NP_055665 15 9605 NP_006047 15 9605 XP_005271506 15 9605 XP_006718849 15 9605 XP_006716792 15 9605 XP_005251441 15 9605 XP_005251440 15 9605 XP_006716786 15 9605 XP_005251439 15 9605 XP_006714920 15 9605 XP_006714919 15 9605 XP_005265679 15 9605 XP_006712259 15 9605 XP_006712258 15 9605 NP_065908 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 156 RVRAMAIYK 164>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 156 RVRAMAIYK 164>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 156 RVRAMAIYK 164>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 117 RVRAMAIYK 125>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 156 RVRAMAIYK 164>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 24 RVRAMAIYK 32>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 24 RVRAMAIYK 32>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 RVR MAIYK Sbjct: 24 RVRAMAIYK 32>NP_001137429 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 R+RP A+Y Sbjct: 403 RIRPSAVY 410>NP_110411 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 R+RP A+Y Sbjct: 403 RIRPSAVY 410>XP_006715633 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 R+RP A+Y Sbjct: 403 RIRPSAVY 410>XP_006715632 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 R+RP A+Y Sbjct: 403 RIRPSAVY 410>NP_001275655 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVRPMAIY 8 R RP A+Y Sbjct: 463 RARPRALY 470>NP_001121138 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>NP_001121139 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>NP_001121137 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 491 KPMIIYK 497>NP_001121135 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 527 KPMIIYK 533>NP_001121134 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 491 KPMIIYK 497>NP_653235 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVRPMAIYK 9 + PMAIY+ Sbjct: 56 KFNPMAIYE 64>NP_001244959 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 499 KPMIIYK 505>NP_001244958 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 508 KPMIIYK 514>XP_005252002 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 491 KPMIIYK 497>XP_005252001 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>XP_006717142 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>XP_005252000 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>XP_006717141 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>XP_006717140 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>XP_006717139 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 502 KPMIIYK 508>XP_005251997 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 512 KPMIIYK 518>XP_006717138 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 580 KPMIIYK 586>XP_005264922 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVRPMAIYK 9 + PMAIY+ Sbjct: 56 KFNPMAIYE 64>XP_006713031 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVRPMAIYK 9 + PMAIY+ Sbjct: 56 KFNPMAIYE 64>NP_001121136 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 491 KPMIIYK 497>NP_000168 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 542 KPMIIYK 548>NP_937895 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RPMAIYK 9 +PM IYK Sbjct: 491 KPMIIYK 497>NP_689935 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVRPMAIY 8 R PMA+Y Sbjct: 304 RKNPMALY 311>NP_659403 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 1933 VRPSSVYR 1940>NP_001171175 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 469 VRPSSVYR 476>NP_002821 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRPMAIY 8 VRP A+Y Sbjct: 601 VRPNAVY 607>NP_001035888 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_004198 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001193880 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001193881 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001035887 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001193879 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001135778 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVRPMAIYK 9 +VRP +YK Sbjct: 131 QVRPGPVYK 139>NP_055665 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 R RP+++Y Sbjct: 492 RPRPLSVY 499>NP_006047 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRPMAIY 8 VRP A+Y Sbjct: 222 VRPRALY 228>XP_005271506 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVRPMAIY 8 R PMA+Y Sbjct: 303 RKNPMALY 310>XP_006718849 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVRPMAIY 8 R PMA+Y Sbjct: 311 RKNPMALY 318>XP_006716792 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 469 VRPSSVYR 476>XP_005251441 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 469 VRPSSVYR 476>XP_005251440 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 470 VRPSSVYR 477>XP_006716786 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 1933 VRPSSVYR 1940>XP_005251439 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPMAIYK 9 VRP ++Y+ Sbjct: 1933 VRPSSVYR 1940>XP_006714920 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVRPMAIYK 9 +VRP +YK Sbjct: 131 QVRPGPVYK 139>XP_006714919 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVRPMAIYK 9 +VRP +YK Sbjct: 131 QVRPGPVYK 139>XP_005265679 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVRPMAIY 8 R RP+++Y Sbjct: 492 RPRPLSVY 499>XP_006712259 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRPMAIY 8 VRP A+Y Sbjct: 222 VRPRALY 228>XP_006712258 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRPMAIY 8 VRP A+Y Sbjct: 222 VRPRALY 228>NP_065908 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVRPMAIYK 9 +VRP+A +K Sbjct: 130 KVRPLARWK 138Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.145 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 514,914 Number of extensions: 750 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |