Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 21 175 NP_059129 20 509 NP_001003892 18 1935 XP_005269819 18 1935 NP_001138432 18 1935 NP_005370 17 2528 NP_001242970 17 2528 NP_703147 17 3301 NP_001152860 17 3301 NP_001152859 17 3301 XP_005253400 17 4312 NP_001107 16 5631 NP_056020 16 5631 NP_115565 16 5631 XP_005255136 16 5631 XP_006720028 16 5631 XP_005268363 16 5631 XP_005268362 16 5631 XP_005268358 16 5631 XP_005268360 16 5631 XP_005268357 16 5631 XP_005268356 16 5631 NP_000375 16 7355 NP_001273415 16 7355 NP_001273414 16 7355 NP_899180 16 7355 NP_003825 16 7355 NP_060626 15 9605 NP_056193 15 9605 NP_055828 15 9605 NP_001009999 15 9605 NP_116219 15 9605 NP_000467 15 9605 NP_001271216 15 9605 NP_001103132 15 9605 NP_001271218 15 9605 NP_001271215 15 9605 NP_001271214 15 9605 NP_001271217 15 9605 NP_056341 15 9605 NP_001107604 15 9605 NP_001186499 15 9605 NP_001002837 15 9605 XP_006724293 15 9605 XP_005256262 15 9605 XP_005256261 15 9605 XP_005251845 15 9605 XP_005251843 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_006711435 15 9605 XP_006711434 15 9605 XP_006711433 15 9605 XP_006711432 15 9605 XP_006711431 15 9605 XP_006711430 15 9605 XP_005245301 15 9605 XP_006711429 15 9605 XP_006710537 15 9605 XP_006710536 15 9605 XP_006710535 15 9605 XP_005245843 15 9605>NP_115927 Length = 1321 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVQRVGFSH 9 RV+RVGFSH Sbjct: 704 RVRRVGFSH 712>NP_059129 Length = 1616 Score = 19.6 bits (39), Expect = 509 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RVQRVGFSH 9 R++R+GFSH Sbjct: 982 RIRRLGFSH 990>NP_001003892 Length = 220 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQRVGFSH 9 R+Q+ GF+H Sbjct: 75 RLQKAGFTH 83>XP_005269819 Length = 220 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQRVGFSH 9 R+Q+ GF+H Sbjct: 75 RLQKAGFTH 83>NP_001138432 Length = 544 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 V RVG+SH Sbjct: 454 VSRVGYSH 461>NP_005370 Length = 1043 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQRVGFSH 9 RV+R G++H Sbjct: 619 RVRRAGYAH 627>NP_001242970 Length = 1043 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQRVGFSH 9 RV+R G++H Sbjct: 619 RVRRAGYAH 627>NP_703147 Length = 566 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVQRVGF 7 R+QRVGF Sbjct: 482 RLQRVGF 488>NP_001152860 Length = 480 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVQRVGF 7 R+QRVGF Sbjct: 396 RLQRVGF 402>NP_001152859 Length = 506 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVQRVGF 7 R+QRVGF Sbjct: 422 RLQRVGF 428>XP_005253400 Length = 412 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVQRVGFS 8 ++QR+GFS Sbjct: 401 QIQRLGFS 408>NP_001107 Length = 1353 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVGFSH 9 RVGF+H Sbjct: 1164 RVGFNH 1169>NP_056020 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>NP_115565 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005255136 Length = 1372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVGFSH 9 RVGF+H Sbjct: 1183 RVGFNH 1188>XP_006720028 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005268363 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005268362 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005268358 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005268360 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005268357 Length = 1171 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>XP_005268356 Length = 1192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRVGFSH 9 VQR+GF++ Sbjct: 518 VQRLGFTY 525>NP_000375 Length = 4563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVQRVGFSH 9 +VQ V FSH Sbjct: 1858 KVQGVEFSH 1866>NP_001273415 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 RV+R GFS Sbjct: 112 RVERWGFS 119>NP_001273414 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 RV+R GFS Sbjct: 285 RVERWGFS 292>NP_899180 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 RV+R GFS Sbjct: 296 RVERWGFS 303>NP_003825 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 RV+R GFS Sbjct: 275 RVERWGFS 282>NP_060626 Length = 4363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q +GFS Sbjct: 2644 RLQELGFS 2651>NP_056193 Length = 4388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q +GFS Sbjct: 2644 RLQELGFS 2651>NP_055828 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQR+GF + Sbjct: 651 VQRMGFGN 658>NP_001009999 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQR+GF + Sbjct: 675 VQRMGFGN 682>NP_116219 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VQRVGFSH 9 VQ+ GF H Sbjct: 567 VQKQGFHH 574>NP_000467 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQ+ G++H Sbjct: 29 VQKYGYTH 36>NP_001271216 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 342 RVGFRH 347>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QRVGFSH 9 QR+G SH Sbjct: 491 QRLGVSH 497>NP_001271218 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 410 RVGFRH 415>NP_001271215 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 710 RVGFRH 715>NP_001271214 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 777 RVGFRH 782>NP_001271217 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 410 RVGFRH 415>NP_056341 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+QR+G S Sbjct: 481 RIQRIGGS 488>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 399 ERIGYTH 405>NP_001186499 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+QR+G S Sbjct: 481 RIQRIGGS 488>NP_001002837 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 409 RVGFRH 414>XP_006724293 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVGFSH 9 RVGF H Sbjct: 473 RVGFRH 478>XP_005256262 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VQRVGFSH 9 VQ+ GF H Sbjct: 386 VQKQGFHH 393>XP_005256261 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VQRVGFSH 9 VQ+ GF H Sbjct: 484 VQKQGFHH 491>XP_005251845 Length = 187 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQ+ G++H Sbjct: 22 VQKYGYTH 29>XP_005251843 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQ+ G++H Sbjct: 45 VQKYGYTH 52>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 371 ERIGYTH 377>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 428 ERIGYTH 434>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 399 ERIGYTH 405>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 428 ERIGYTH 434>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 428 ERIGYTH 434>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 QRVGFSH 9 +R+G++H Sbjct: 428 ERIGYTH 434>XP_006711435 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 83 RIQKDGFS 90>XP_006711434 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 83 RIQKDGFS 90>XP_006711433 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 227 RIQKDGFS 234>XP_006711432 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 274 RIQKDGFS 281>XP_006711431 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 274 RIQKDGFS 281>XP_006711430 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 274 RIQKDGFS 281>XP_005245301 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 274 RIQKDGFS 281>XP_006711429 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQRVGFS 8 R+Q+ GFS Sbjct: 274 RIQKDGFS 281>XP_006710537 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQR+GF + Sbjct: 677 VQRMGFGN 684>XP_006710536 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQR+GF + Sbjct: 677 VQRMGFGN 684>XP_006710535 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQR+GF + Sbjct: 657 VQRMGFGN 664>XP_005245843 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRVGFSH 9 VQR+GF + Sbjct: 671 VQRMGFGN 678Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.143 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,725 Number of extensions: 679 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |