Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1482 NP_001035957 18 1482 XP_006721990 18 1482 XP_006721989 18 1482 XP_005258041 18 1482 XP_006721988 18 1482 XP_006721987 18 1482 XP_006721986 18 1482 XP_005258040 18 1482 XP_006721985 18 1482 NP_002728 17 3301 NP_001229713 16 5631 NP_000402 16 5631 NP_001229714 16 5631 NP_115545 16 5631 XP_006724059 16 5631 XP_006724058 16 5631 XP_006724057 16 5631 XP_005261013 16 5631 XP_005261012 16 5631 XP_006724056 16 5631 XP_005261010 16 5631 NP_079421 16 7355 NP_056504 16 7355 NP_037373 16 7355 XP_005255967 16 7355 XP_005255966 16 7355 XP_005270233 16 7355 XP_005270231 16 7355 XP_005270230 16 7355 XP_005270229 16 7355 XP_005270228 16 7355 XP_005250035 16 7355 XP_005250034 16 7355 XP_005250033 16 7355 NP_001074001 16 7355 NP_001273331 15 9605 NP_000237 15 9605 NP_758963 15 9605 NP_001129610 15 9605 NP_631896 15 9605 NP_001095139 15 9605 NP_001274150 15 9605 NP_005409 15 9605 NP_003857 15 9605 NP_998783 15 9605 NP_036556 15 9605 XP_006720946 15 9605 XP_005255380 15 9605 XP_006720945 15 9605 XP_006720944 15 9605 XP_005255378 15 9605 XP_005255377 15 9605 XP_006720943 15 9605 XP_005253141 15 9605 XP_005253140 15 9605 XP_005253137 15 9605 XP_005253136 15 9605 XP_006718348 15 9605 XP_006718347 15 9605 XP_005253134 15 9605 XP_006714467 15 9605 XP_005263382 15 9605 XP_005263381 15 9605 XP_006714466 15 9605 XP_005263380 15 9605 XP_006714465 15 9605 XP_005263379 15 9605 XP_006714464 15 9605 XP_006714463 15 9605 XP_005273153 15 9605 XP_006711335 15 9605>NP_000258 Length = 2818 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1949 RVTAILDKL 1957>NP_001035957 Length = 2839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1970 RVTAILDKL 1978>XP_006721990 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1980 RVTAILDKL 1988>XP_006721989 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1980 RVTAILDKL 1988>XP_005258041 Length = 2836 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1949 RVTAILDKL 1957>XP_006721988 Length = 2846 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1959 RVTAILDKL 1967>XP_006721987 Length = 2849 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1980 RVTAILDKL 1988>XP_006721986 Length = 2854 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1967 RVTAILDKL 1975>XP_005258040 Length = 2857 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1970 RVTAILDKL 1978>XP_006721985 Length = 2867 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AILDKL Sbjct: 1980 RVTAILDKL 1988>NP_002728 Length = 672 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVIAILDK 8 RV+A+LDK Sbjct: 389 RVLALLDK 396>NP_001229713 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>NP_000402 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>NP_001229714 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>NP_115545 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVIAILD 7 RVIA+LD Sbjct: 236 RVIAVLD 242>XP_006724059 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>XP_006724058 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>XP_006724057 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>XP_005261013 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>XP_005261012 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 639 RVVTVLEKL 647>XP_006724056 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 734 RVVTVLEKL 742>XP_005261010 Length = 873 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ +L+KL Sbjct: 786 RVVTVLEKL 794>NP_079421 Length = 1665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 + IA+LDK+ Sbjct: 1552 QTIAVLDKM 1560>NP_056504 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI I DKL Sbjct: 767 RVIFIADKL 775>NP_037373 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AIL+KL Sbjct: 119 RVNAILEKL 127>XP_005255967 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AIL+KL Sbjct: 119 RVNAILEKL 127>XP_005255966 Length = 1190 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV AIL+KL Sbjct: 119 RVNAILEKL 127>XP_005270233 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 + IA+LDK+ Sbjct: 814 QTIAVLDKM 822>XP_005270231 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 + IA+LDK+ Sbjct: 1514 QTIAVLDKM 1522>XP_005270230 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 + IA+LDK+ Sbjct: 1514 QTIAVLDKM 1522>XP_005270229 Length = 1637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 + IA+LDK+ Sbjct: 1524 QTIAVLDKM 1532>XP_005270228 Length = 1666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 + IA+LDK+ Sbjct: 1553 QTIAVLDKM 1561>XP_005250035 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI I DKL Sbjct: 767 RVIFIADKL 775>XP_005250034 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI I DKL Sbjct: 767 RVIFIADKL 775>XP_005250033 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI I DKL Sbjct: 767 RVIFIADKL 775>NP_001074001 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA+LDK+ Sbjct: 411 IIALLDKV 418>NP_001273331 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 415 RVIAVLGK 422>NP_000237 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 414 RVIAVLGK 421>NP_758963 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VIAILDKL 9 V+AILD L Sbjct: 603 VVAILDHL 610>NP_001129610 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ ++DK+ Sbjct: 329 RVLGVIDKV 337>NP_631896 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 478 RVIFVADKL 486>NP_001095139 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 535 IIAMVDKL 542>NP_001274150 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ ++DK+ Sbjct: 160 RVLGVIDKV 168>NP_005409 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 898 RVIFVADKL 906>NP_003857 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 535 IIAMVDKL 542>NP_998783 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 898 RVIFVADKL 906>NP_036556 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ ++DK+ Sbjct: 341 RVLGVIDKV 349>XP_006720946 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 365 RVIAVLGK 372>XP_005255380 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 366 RVIAVLGK 373>XP_006720945 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 380 RVIAVLGK 387>XP_006720944 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 381 RVIAVLGK 388>XP_005255378 Length = 1145 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 429 RVIAVLGK 436>XP_005255377 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 430 RVIAVLGK 437>XP_006720943 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVIAILDK 8 RVIA+L K Sbjct: 492 RVIAVLGK 499>XP_005253141 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 478 RVIFVADKL 486>XP_005253140 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 478 RVIFVADKL 486>XP_005253137 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 898 RVIFVADKL 906>XP_005253136 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 898 RVIFVADKL 906>XP_006718348 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 898 RVIFVADKL 906>XP_006718347 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 898 RVIFVADKL 906>XP_005253134 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVIAILDKL 9 RVI + DKL Sbjct: 928 RVIFVADKL 936>XP_006714467 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 544 IIAMVDKL 551>XP_005263382 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 350 IIAMVDKL 357>XP_005263381 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 359 IIAMVDKL 366>XP_006714466 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 359 IIAMVDKL 366>XP_005263380 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 406 IIAMVDKL 413>XP_006714465 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 535 IIAMVDKL 542>XP_005263379 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 544 IIAMVDKL 551>XP_006714464 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 535 IIAMVDKL 542>XP_006714463 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VIAILDKL 9 +IA++DKL Sbjct: 544 IIAMVDKL 551>XP_005273153 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ ++DK+ Sbjct: 160 RVLGVIDKV 168>XP_006711335 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RVIAILDKL 9 RV+ ++DK+ Sbjct: 220 RVLGVIDKV 228Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.158 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,410 Number of extensions: 488 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |