Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_619639 16 7355 NP_056127 16 7355 XP_006714407 16 7355 XP_006714405 16 7355 XP_005263349 16 7355 XP_005263348 16 7355 XP_005263347 16 7355 XP_005263346 16 7355 XP_005263345 16 7355 XP_005263344 16 7355 XP_005263343 16 7355 XP_005263342 16 7355 XP_005263341 16 7355 XP_005263340 16 7355 XP_005263339 16 7355 NP_004971 15 9605 NP_751948 15 9605 NP_036377 15 9605 NP_006176 15 9605 NP_071928 15 9605 NP_001273490 15 9605 XP_005267471 15 9605 XP_005267470 15 9605 XP_006718633 15 9605 XP_006718632 15 9605 XP_006718631 15 9605 XP_006718630 15 9605 XP_006718629 15 9605 XP_006718628 15 9605 XP_006718627 15 9605 XP_006718626 15 9605 XP_006718625 15 9605 XP_006714549 15 9605 XP_006714548 15 9605 XP_005248392 15 9605 XP_005248393 15 9605 XP_005248391 15 9605 XP_005248390 15 9605 XP_006710694 15 9605 XP_006710693 15 9605 XP_006710692 15 9605 XP_005270908 15 9605>NP_619639 Length = 4074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTTSLISSL 9 R+T +ISSL Sbjct: 3673 RSTGMISSL 3681>NP_056127 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4025 TTSLVSS 4031>XP_006714407 Length = 5004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4024 TTSLVSS 4030>XP_006714405 Length = 4103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 3123 TTSLVSS 3129>XP_005263349 Length = 4410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 3430 TTSLVSS 3436>XP_005263348 Length = 4443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 3463 TTSLVSS 3469>XP_005263347 Length = 4640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4046 TTSLVSS 4052>XP_005263346 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4003 TTSLVSS 4009>XP_005263345 Length = 4991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4011 TTSLVSS 4017>XP_005263344 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4025 TTSLVSS 4031>XP_005263343 Length = 5009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4029 TTSLVSS 4035>XP_005263342 Length = 5025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4045 TTSLVSS 4051>XP_005263341 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4046 TTSLVSS 4052>XP_005263340 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4046 TTSLVSS 4052>XP_005263339 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSLISS 8 TTSL+SS Sbjct: 4046 TTSLVSS 4052>NP_004971 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 +TTSLI S Sbjct: 467 KTTSLIES 474>NP_751948 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 +TTSLI S Sbjct: 467 KTTSLIES 474>NP_036377 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 R TSL+SS Sbjct: 30 RQTSLVSS 37>NP_006176 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>NP_071928 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>NP_001273490 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_005267471 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 R TSL+SS Sbjct: 30 RQTSLVSS 37>XP_005267470 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 R TSL+SS Sbjct: 30 RQTSLVSS 37>XP_006718633 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718632 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718631 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718630 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718629 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718628 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718627 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718626 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006718625 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RTTSLISSL 9 R SLISSL Sbjct: 1222 RKNSLISSL 1230>XP_006714549 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>XP_006714548 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>XP_005248392 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>XP_005248393 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>XP_005248391 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>XP_005248390 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTSLISSL 9 T SLISSL Sbjct: 17 TESLISSL 24>XP_006710694 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 +TTSLI S Sbjct: 467 KTTSLIES 474>XP_006710693 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 +TTSLI S Sbjct: 467 KTTSLIES 474>XP_006710692 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 +TTSLI S Sbjct: 467 KTTSLIES 474>XP_005270908 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTTSLISS 8 +TTSLI S Sbjct: 467 KTTSLIES 474Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.116 0.256 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 270,118 Number of extensions: 390 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |