Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 390 NP_001091680 20 390 NP_001091679 20 390 XP_006713048 20 390 XP_006713047 20 390 XP_006713046 20 390 XP_005264943 20 390 NP_002221 17 3301 NP_068831 17 3301 XP_006721941 17 3301 XP_006721940 17 3301 XP_006721939 17 3301 XP_006721938 17 3301 XP_006721937 17 3301 XP_006721936 17 3301 XP_006721935 17 3301 XP_006721934 17 3301 XP_005257370 17 3301 NP_114113 17 4312 NP_000334 16 5631 NP_001243243 16 5631 NP_689777 16 5631 NP_060360 16 5631 NP_056058 16 5631 NP_001363 16 5631 XP_006721528 16 5631 XP_006716574 16 5631 XP_006716573 16 5631 XP_005250858 16 5631 XP_005250857 16 5631 NP_061167 16 5631 NP_000205 16 7355 NP_001171630 16 7355 NP_003350 16 7355 XP_006714092 16 7355 XP_005262724 16 7355 NP_005600 15 9605 NP_002854 15 9605 NP_004804 15 9605 NP_476515 15 9605 NP_005433 15 9605 NP_001265112 15 9605 NP_001265111 15 9605 NP_002853 15 9605 NP_001138462 15 9605 NP_001243275 15 9605 NP_001026872 15 9605 NP_001243277 15 9605 NP_001243276 15 9605 XP_006723664 15 9605 NP_001005245 15 9605>NP_001895 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 200 RTMQNTNDV 208>NP_001091680 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 200 RTMQNTNDV 208>NP_001091679 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 200 RTMQNTNDV 208>XP_006713048 Length = 720 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 200 RTMQNTNDV 208>XP_006713047 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 193 RTMQNTNDV 201>XP_006713046 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 193 RTMQNTNDV 201>XP_005264943 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTMQNTNGV 9 RTMQNTN V Sbjct: 200 RTMQNTNDV 208>NP_002221 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>NP_068831 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721941 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721940 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721939 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721938 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721937 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721936 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 191 RTMQNTS 197>XP_006721935 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 208 RTMQNTS 214>XP_006721934 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 229 RTMQNTS 235>XP_005257370 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTMQNTN 7 RTMQNT+ Sbjct: 229 RTMQNTS 235>NP_114113 Length = 913 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TMQNTNGV 9 T+QN NG+ Sbjct: 74 TLQNNNGL 81>NP_000334 Length = 664 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT+ N NG+ Sbjct: 642 RTVLNVNGI 650>NP_001243243 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT+ N NG+ Sbjct: 515 RTVLNVNGI 523>NP_689777 Length = 3997 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>NP_060360 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>NP_056058 Length = 863 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>NP_001363 Length = 4486 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 R +QNT G+ Sbjct: 2995 RFLQNTEGI 3003>XP_006721528 Length = 3869 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 R +QNT G+ Sbjct: 2995 RFLQNTEGI 3003>XP_006716574 Length = 968 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>XP_006716573 Length = 1776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>XP_005250858 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>XP_005250857 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TMQNTNG 8 TM+NT+G Sbjct: 543 TMENTSG 549>NP_061167 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTMQNTNG 8 RT++N NG Sbjct: 135 RTLRNLNG 142>NP_000205 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TMQNTNG 8 +MQN NG Sbjct: 41 SMQNVNG 47>NP_001171630 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTMQNTNG 8 R +QN+NG Sbjct: 18 RIVQNSNG 25>NP_003350 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTMQNTNG 8 R +QN+NG Sbjct: 115 RIVQNSNG 122>XP_006714092 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTMQNTNG 8 R +QN+NG Sbjct: 115 RIVQNSNG 122>XP_005262724 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTMQNTNG 8 R +QN+NG Sbjct: 128 RIVQNSNG 135>NP_005600 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTMQNT 6 RT+QNT Sbjct: 94 RTLQNT 99>NP_002854 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTMQNT 6 RT+QNT Sbjct: 94 RTLQNT 99>NP_004804 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTMQNT 6 RT+QNT Sbjct: 176 RTLQNT 181>NP_476515 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTMQNT 6 RT+QNT Sbjct: 176 RTLQNT 181>NP_005433 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT+ TNG+ Sbjct: 494 RTVPQTNGL 502>NP_001265112 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT+ TNG+ Sbjct: 218 RTVPQTNGL 226>NP_001265111 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT+ TNG+ Sbjct: 513 RTVPQTNGL 521>NP_002853 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTMQNT 6 RT+QNT Sbjct: 94 RTLQNT 99>NP_001138462 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TMQNTNGV 9 TM+NT+ V Sbjct: 1249 TMENTSAV 1256>NP_001243275 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT++ NGV Sbjct: 218 RTIEKINGV 226>NP_001026872 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT++ NGV Sbjct: 218 RTIEKINGV 226>NP_001243277 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT++ NGV Sbjct: 160 RTIEKINGV 168>NP_001243276 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTMQNTNGV 9 RT++ NGV Sbjct: 272 RTIEKINGV 280>XP_006723664 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTMQNT 6 RT+QNT Sbjct: 94 RTLQNT 99>NP_001005245 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 MQNTNG 8 M NTNG Sbjct: 1 MSNTNG 6Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.118 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 610,710 Number of extensions: 869 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |