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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000236                                                              18    1135
NP_001120972                                                           18    1135
XP_006716054                                                           18    1135
XP_006716053                                                           18    1135
XP_006716052                                                           18    1135
XP_006716051                                                           18    1135
NP_570843                                                              17    2528
NP_001128529                                                           17    2528
NP_001137357                                                           16    7355
NP_001137358                                                           16    7355
NP_001231921                                                           16    7355
NP_001231919                                                           16    7355
NP_002471                                                              16    7355
XP_005268948                                                           16    7355
XP_005268946                                                           16    7355
XP_005268944                                                           16    7355
XP_005268945                                                           16    7355
XP_005268943                                                           16    7355
XP_005268942                                                           16    7355
NP_001244119                                                           15    9605
NP_742017                                                              15    9605
XP_006716259                                                           15    9605
XP_006716258                                                           15    9605
XP_005250789                                                           15    9605
XP_005250788                                                           15    9605
XP_005250787                                                           15    9605
XP_005250786                                                           15    9605
XP_006716257                                                           15    9605
XP_005250785                                                           15    9605
XP_005250784                                                           15    9605
XP_005250783                                                           15    9605

>NP_000236
          Length = 1390

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RSVSSTTEM 9
           RSVS TTEM
Sbjct: 987 RSVSPTTEM 995



>NP_001120972
          Length = 1408

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RSVSSTTEM 9
            RSVS TTEM
Sbjct: 1005 RSVSPTTEM 1013



>XP_006716054
          Length = 960

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RSVSSTTEM 9
           RSVS TTEM
Sbjct: 557 RSVSPTTEM 565



>XP_006716053
          Length = 960

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RSVSSTTEM 9
           RSVS TTEM
Sbjct: 557 RSVSPTTEM 565



>XP_006716052
          Length = 1409

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RSVSSTTEM 9
            RSVS TTEM
Sbjct: 1006 RSVSPTTEM 1014



>XP_006716051
          Length = 1427

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RSVSSTTEM 9
            RSVS TTEM
Sbjct: 1024 RSVSPTTEM 1032



>NP_570843
          Length = 581

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           SVSSTTE+
Sbjct: 501 SVSSTTEL 508



>NP_001128529
          Length = 587

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           SVSSTTE+
Sbjct: 507 SVSSTTEL 514



>NP_001137357
          Length = 1030

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>NP_001137358
          Length = 943

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 568 TVSSTTEV 575



>NP_001231921
          Length = 974

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 599 TVSSTTEV 606



>NP_001231919
          Length = 995

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>NP_002471
          Length = 1030

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>XP_005268948
          Length = 990

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 599 TVSSTTEV 606



>XP_005268946
          Length = 999

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>XP_005268944
          Length = 1005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>XP_005268945
          Length = 1005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>XP_005268943
          Length = 1034

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 643 TVSSTTEV 650



>XP_005268942
          Length = 1046

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   SVSSTTEM 9
           +VSSTTE+
Sbjct: 655 TVSSTTEV 662



>NP_001244119
          Length = 999

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>NP_742017
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_006716259
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_006716258
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_005250789
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_005250788
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_005250787
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_005250786
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_006716257
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_005250785
          Length = 984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SVSSTTE 8
           +VSSTTE
Sbjct: 899 NVSSTTE 905



>XP_005250784
          Length = 1190

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    SVSSTTE 8
            +VSSTTE
Sbjct: 1105 NVSSTTE 1111



>XP_005250783
          Length = 1249

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    SVSSTTE 8
            +VSSTTE
Sbjct: 1164 NVSSTTE 1170



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.289   0.0937    0.200 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 271,242
Number of extensions: 467
Number of successful extensions: 31
Number of sequences better than 10000.0: 31
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 31
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.1 bits)
S2: 28 (15.4 bits)