Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_689475 18 1935 XP_006722996 18 1935 XP_005260201 18 1935 XP_005260199 18 1935 NP_002068 17 4312 XP_006717126 17 4312 XP_005251986 17 4312 XP_006717125 17 4312 NP_001229695 16 5631 NP_004737 16 5631 NP_001003809 16 5631 NP_001229693 16 5631 NP_001229690 16 5631 NP_001229692 16 5631 NP_001229691 16 5631 NP_001229694 16 5631 XP_005258233 16 5631 XP_005258232 16 5631 XP_005258231 16 5631 XP_006722430 16 5631 XP_005258230 16 5631 XP_005258229 16 5631 XP_005258228 16 5631 NP_001129465 16 7355 NP_694943 16 7355 XP_006722455 16 7355 XP_005258255 16 7355 NP_004250 15 9605 NP_065829 15 9605 XP_005257879 15 9605 XP_006722249 15 9605 XP_005257875 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 110 RSVSEESAN 118>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 110 RSVSEESAN 118>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSVSEES N Sbjct: 111 RSVSEESAN 119>NP_689475 Length = 499 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSV+EE VN Sbjct: 79 RSVTEEKVN 87>XP_006722996 Length = 404 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSV+EE VN Sbjct: 84 RSVTEEKVN 92>XP_005260201 Length = 420 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSV+EE VN Sbjct: 84 RSVTEEKVN 92>XP_005260199 Length = 504 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 RSV+EE VN Sbjct: 84 RSVTEEKVN 92>NP_002068 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSVSEESV 8 RSVS+ESV Sbjct: 27 RSVSKESV 34>XP_006717126 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSVSEESV 8 RSVS+ESV Sbjct: 27 RSVSKESV 34>XP_005251986 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSVSEESV 8 RSVS+ESV Sbjct: 27 RSVSKESV 34>XP_006717125 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSVSEESV 8 RSVS+ESV Sbjct: 27 RSVSKESV 34>NP_001229695 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 107 RAVSEVSIN 115>NP_004737 Length = 977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 409 RAVSEVSIN 417>NP_001003809 Length = 675 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 107 RAVSEVSIN 115>NP_001229693 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 115 RAVSEVSIN 123>NP_001229690 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 409 RAVSEVSIN 417>NP_001229692 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 121 RAVSEVSIN 129>NP_001229691 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 121 RAVSEVSIN 129>NP_001229694 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 107 RAVSEVSIN 115>XP_005258233 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 94 RAVSEVSIN 102>XP_005258232 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 115 RAVSEVSIN 123>XP_005258231 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 117 RAVSEVSIN 125>XP_006722430 Length = 731 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 153 RAVSEVSIN 161>XP_005258230 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 159 RAVSEVSIN 167>XP_005258229 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 409 RAVSEVSIN 417>XP_005258228 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSVSEESVN 9 R+VSE S+N Sbjct: 409 RAVSEVSIN 417>NP_001129465 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSEESVN 9 VSEES+N Sbjct: 207 VSEESLN 213>NP_694943 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSEESVN 9 VSEES+N Sbjct: 146 VSEESLN 152>XP_006722455 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSEESVN 9 VSEES+N Sbjct: 207 VSEESLN 213>XP_005258255 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSEESVN 9 VSEES+N Sbjct: 146 VSEESLN 152>NP_004250 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSVSEESVN 9 RSV EE+ N Sbjct: 957 RSVKEEAQN 965>NP_065829 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RSVSEES 7 RSVSE+S Sbjct: 288 RSVSEDS 294>XP_005257879 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSVSEESVN 9 RSV EE+ N Sbjct: 552 RSVKEEAQN 560>XP_006722249 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSVSEESVN 9 RSV EE+ N Sbjct: 573 RSVKEEAQN 581>XP_005257875 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSVSEESVN 9 RSV EE+ N Sbjct: 978 RSVKEEAQN 986Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.281 0.0999 0.213 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,620 Number of extensions: 445 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |