Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 509 NP_060785 20 509 NP_361014 20 509 NP_036432 18 1482 NP_387449 18 1482 NP_387448 18 1482 NP_001243785 18 1482 NP_378663 18 1482 NP_003930 18 1482 XP_005270321 18 1482 XP_006718117 18 1482 XP_005265916 18 1482 XP_005265915 18 1482 XP_005265914 18 1482 XP_005265913 18 1482 XP_005265912 18 1482 XP_006721506 17 2528 XP_005256500 17 2528 XP_006721505 17 2528 XP_006721504 17 2528 NP_998762 17 2528 NP_612433 17 4312 NP_000246 17 4312 XP_005251743 17 4312 XP_005251742 17 4312 XP_006717010 17 4312 XP_005251741 17 4312 XP_005251740 17 4312 XP_005249200 17 4312 NP_065901 16 5631 XP_005259076 16 5631 XP_006721302 16 5631 XP_006721301 16 5631 XP_005256129 16 5631 XP_005256127 16 5631 NP_060178 16 5631 NP_004575 16 7355 NP_001230153 16 7355 XP_006718715 16 7355 NP_775738 16 7355 NP_000247 15 9605 NP_002766 15 9605 NP_001017975 15 9605 NP_079220 15 9605 NP_056234 15 9605 NP_057133 15 9605 NP_055671 15 9605 NP_065159 15 9605 XP_006725392 15 9605 XP_005274542 15 9605 XP_005258070 15 9605 XP_005267778 15 9605 XP_006718301 15 9605 XP_006711754 15 9605 XP_005245736 15 9605 XP_005245735 15 9605 XP_006711753 15 9605 XP_006710458 15 9605 NP_001186880 15 9605 NP_079423 15 9605>NP_001013433 Length = 589 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 RRVVSGAY Sbjct: 394 RRVVSGAY 401>NP_060785 Length = 627 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 RRVVSGAY Sbjct: 432 RRVVSGAY 439>NP_361014 Length = 707 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 RRVVSGAY Sbjct: 512 RRVVSGAY 519>NP_036432 Length = 542 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 454 KRIVSGAY 461>NP_387449 Length = 508 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 420 KRIVSGAY 427>NP_387448 Length = 529 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 441 KRIVSGAY 448>NP_001243785 Length = 579 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 491 KRIVSGAY 498>NP_378663 Length = 605 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 517 KRIVSGAY 524>NP_003930 Length = 569 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 481 KRIVSGAY 488>XP_005270321 Length = 326 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 238 KRIVSGAY 245>XP_006718117 Length = 732 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 644 KRIVSGAY 651>XP_005265916 Length = 494 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 406 KRIVSGAY 413>XP_005265915 Length = 510 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 422 KRIVSGAY 429>XP_005265914 Length = 515 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 427 KRIVSGAY 434>XP_005265913 Length = 531 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 443 KRIVSGAY 450>XP_005265912 Length = 563 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRVVSGAY 8 +R+VSGAY Sbjct: 475 KRIVSGAY 482>XP_006721506 Length = 410 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVSGAYH 9 ++VSG YH Sbjct: 264 KIVSGKYH 271>XP_005256500 Length = 458 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVSGAYH 9 ++VSG YH Sbjct: 312 KIVSGKYH 319>XP_006721505 Length = 492 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVSGAYH 9 ++VSG YH Sbjct: 346 KIVSGKYH 353>XP_006721504 Length = 492 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVSGAYH 9 ++VSG YH Sbjct: 346 KIVSGKYH 353>NP_998762 Length = 492 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVVSGAYH 9 ++VSG YH Sbjct: 346 KIVSGKYH 353>NP_612433 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RR++S YH Sbjct: 329 RRLLSACYH 337>NP_000246 Length = 750 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+VSGAY Sbjct: 581 RMVSGAY 587>XP_005251743 Length = 404 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RR++S YH Sbjct: 202 RRLLSACYH 210>XP_005251742 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RR++S YH Sbjct: 467 RRLLSACYH 475>XP_006717010 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RR++S YH Sbjct: 433 RRLLSACYH 441>XP_005251741 Length = 651 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RR++S YH Sbjct: 467 RRLLSACYH 475>XP_005251740 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RR++S YH Sbjct: 467 RRLLSACYH 475>XP_005249200 Length = 750 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+VSGAY Sbjct: 581 RMVSGAY 587>NP_065901 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+V+GAY Sbjct: 473 RIVNGAY 479>XP_005259076 Length = 478 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 RV+SG+Y Sbjct: 246 RVISGSY 252>XP_006721302 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+V+GAY Sbjct: 244 RIVNGAY 250>XP_006721301 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+V+GAY Sbjct: 347 RIVNGAY 353>XP_005256129 Length = 518 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+V+GAY Sbjct: 371 RIVNGAY 377>XP_005256127 Length = 650 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 R+V+GAY Sbjct: 503 RIVNGAY 509>NP_060178 Length = 478 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVVSGAY 8 RV+SG+Y Sbjct: 246 RVISGSY 252>NP_004575 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RRV+ +YH Sbjct: 174 RRVILRSYH 182>NP_001230153 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RRV+ +YH Sbjct: 98 RRVILRSYH 106>XP_006718715 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRVVSGAYH 9 RRV+ +YH Sbjct: 185 RRVILRSYH 193>NP_775738 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSGAYH 9 VSGA+H Sbjct: 265 VSGAFH 270>NP_000247 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRVVSGAY 8 RRV SG Y Sbjct: 1036 RRVHSGTY 1043>NP_002766 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVSGAY 8 V+SGAY Sbjct: 408 VISGAY 413>NP_001017975 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 R+VV GA+ Sbjct: 595 RKVVEGAF 602>NP_079220 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRVVSG 6 RRVVSG Sbjct: 22 RRVVSG 27>NP_056234 Length = 2828 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RRVVSGAYH 9 R+V+ G+Y+ Sbjct: 1762 RKVIPGSYN 1770>NP_057133 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVSGAYH 9 VV+G YH Sbjct: 77 VVAGYYH 83>NP_055671 Length = 1496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 RRV SGA+ Sbjct: 1257 RRVESGAW 1264>NP_065159 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRVVSGA 7 +R+VSGA Sbjct: 114 KRIVSGA 120>XP_006725392 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRVVSGA 7 +R+VSGA Sbjct: 114 KRIVSGA 120>XP_005274542 Length = 2853 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RRVVSGAYH 9 R+V+ G+Y+ Sbjct: 1787 RKVIPGSYN 1795>XP_005258070 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRVVSGA 7 +R+VSGA Sbjct: 114 KRIVSGA 120>XP_005267778 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVSGAYH 9 VV+G YH Sbjct: 77 VVAGYYH 83>XP_006718301 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRVVSGAY 8 RRV SG Y Sbjct: 1030 RRVHSGTY 1037>XP_006711754 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 RRV SGA+ Sbjct: 925 RRVESGAW 932>XP_005245736 Length = 1496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 RRV SGA+ Sbjct: 1257 RRVESGAW 1264>XP_005245735 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 RRV SGA+ Sbjct: 1268 RRVESGAW 1275>XP_006711753 Length = 1521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 RRV SGA+ Sbjct: 1282 RRVESGAW 1289>XP_006710458 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRVVSGAY 8 R+VV GA+ Sbjct: 6 RKVVEGAF 13>NP_001186880 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRVVSGA 7 +R+VSGA Sbjct: 114 KRIVSGA 120>NP_079423 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRVVSG 6 RRVVSG Sbjct: 11 RRVVSG 16Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.137 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 488,809 Number of extensions: 715 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |